KEGG   Cannabis sativa (hemp): 115706471
Entry
115706471         CDS       T08987                                 
Name
(RefSeq) ATP-dependent helicase BRM
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115706471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csav03021]
    115706471
   03036 Chromosome and associated proteins [BR:csav03036]
    115706471
Transcription machinery [BR:csav03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     115706471
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     115706471
  Chromatin remodeling factors
   BAF complex
    115706471
   PBAF complex
    115706471
   GBAF(ncBAF) complex
    115706471
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII QLQ DEAD Bromodomain AAA_14
Other DBs
NCBI-GeneID: 115706471
NCBI-ProteinID: XP_030489988
LinkDB
Position
1:complement(36555295..36567061)
AA seq 2277 aa
MQSGGGAAGGGPSRNPGGPAGRAPSTSSAASPSSSSSAVSTPHLGFDAIQQHQQHQHQHQ
QIGSRQPLQQQLLRKPEGNESLLAYQAGNLQGALGVGNFTPHGAMPLSQQSRKFFELAQQ
QGSSQEGHNRSQGPDQQVMNPVHQAYLQYAFQAAQQKSALAMQSQQQAKMGMLGPPSGKD
QDTRIGNMKMQELMSIQAGNQAQASSSKSEHFGRGEKQMEQGQPPASDQRSEPKPLSKPA
SMGQLMHGNVVRPMQGPQSQQNVQNMANNQLAMAAQLQAVQAWAVEHNIDLSVPGNVNLV
AQLIPLVQSRLAGQQKANESNMGAQSSPVPVSKQQVTSPQVASENSPHANSSSDASGQSG
SAKAKQAVSSGPFGSSSNAGSVNNSNNIPMQQFPVHGRENQVAFRQPAVTGNGIPMQSQG
NINQGVDQSLHAKNPLSSPESMQMQYSRPVNRSSPQASVSMNERASGTPVQAQGGPSTHA
SQQRPGPSGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLDLQQQPQQQNNA
VGVSVQDKSAGKVVADRVRHMESSEKDTQAAAAMNGQTVLKEEPFTRDEKSNAAAVHAQG
TSAMVKEPPVPVVSSGKEEQQPTVFSAKSDHEVERGTSKALVRSDSVDRGKAVAAHVPVS
DAMQAKKPTQASTAPQPKDVGSARKYHGPLFDFPFFTRKHDSLGPGTMNSNNNNNLTLAY
DVKDLLFEEGVEVLNKKRTENIKKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDIQA
RLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQKALRDKQLKSIFLWRKK
LLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQ
QTSIDGDAAERYAVLSSFLTQTEDYLHKLGSKITAAKNQQEVEEAANAAAAAARHQGLSE
EEVRAAAACAGEEVLIRNRFMEMNAPKDSSSVSKYYSLAHAVNERVIRQPSMLRKGTLRD
YQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLV
NWKSELHTWLPSVSCIYYVGSKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKIDW
KYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNR
KAFHDWFSKPFQREAPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPK
VSIILKCRMSAIQSAIYDWIKSTGTIRVDPEDERRRVQKNPIYTAKVYKTLNNRCMELRK
TCNHPLLNYPYYSDLSKEFIVRSCGKLWIMDRILIKLQRTGHRVLLFSTMTKLLDILEEY
LQWRRLVYRRIDGTTSLEDRESAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVIIYD
PDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKIPSHQKEDELRNGGTVDSEDDLAGK
DRYVGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVH
DVPSLQEVNRMIARSEEEVELFDQMDEEFDWIEEMTSYDQVPKWLRVGTREVNTTVANLS
KRPSKNILFGGNVGVGSNEVGSDSSPKTERRRGRPKGKKHPNYKELDDDNGEYSEASSDE
RNGYSLHEEEGEIGEFEDDEFGGAAAAPECNKDQVEEDGPTCDGVFEYPRTSEGVRVNHT
VEEAGSSGSSSDTRKVTRIVSPVSSQKFGSLSALDSRPGSASKRLTDELEEGEIAVSGDS
HMDHQQSGSWIHEREEAEDEQVLQPKIKRKRSLRIRPRHNVERPEEKSSNETSSLHRGDL
SLQRGDSSLLPFQDHKNVTQLRGDPDIKSYADSNSLRHEQNESLKTRRNLPSRRIANTAK
LHASPKSSPKSGSSRLNNMSASVDDATEHLRDNWDGKVGNSSGTTVLGSKMPEIIQRRCK
NVISKLQRRIDKEGPQIVPLLTDLWKRIENTGYTTGSGNNLLDLRKIDQRIERLEYNGVM
ELVFDVQSMLRSAMHYYAFSHEVRTEARKVHDLFFDILKIAFHDTEFREARSALSFSSPV
STTAAPSPRPAAAVLSKRQKMINEVEPDPSPLQKPQQRGPVYNSEESRMRSLVSQKELRH
GSGSGREQIQQDDSPRPAHPGDLVICKKKRKDREKSLAKVRTGSVGPVSPPNMTRGIKSP
GSVSVTRDTRLTQQATHSPGWANQSAQPSNGGGGSVGWANPVKRLRTDSGKRRPSHL
NT seq 6834 nt   +upstreamnt  +downstreamnt
atgcaatctggtggtggagctgctggaggaggtcccagccggaatccgggaggtccggct
ggtcgggcaccatcgacatcttcggctgcatcgccttcttcttcgtcttctgccgtgtcg
actccgcacttgggtttcgatgcaattcagcagcatcagcaacatcaacatcaacatcag
cagataggttctaggcagccattacaacaacagctactaagaaaacctgagggcaatgaa
tccctgctagcataccaagctggcaatctccaaggagctttgggagtaggcaattttaca
cctcatggtgcaatgccgctgtctcaacagtcgaggaaattcttcgaattggctcagcaa
cagggttcttcccaagaaggtcacaataggagccaagggcccgaccaacaagtaatgaat
cccgtccatcaagcttatcttcagtatgcttttcaggcagcgcaacagaaatctgctttg
gcaatgcagtcacaacagcaagctaaaatgggaatgttaggccctccatctggaaaggat
caggacacacgaattggaaatatgaaaatgcaagaacttatgtctattcaggctggtaat
caggcacaagcatcttcatccaagtctgagcattttggtcgtggagaaaaacagatggag
caaggacagccaccagcctctgaccagaggagtgaacctaagccattgtcgaaacctgcc
agtatgggccaattaatgcatggaaatgtcgttaggcccatgcaggggccgcagtctcag
caaaatgtacaaaacatggcaaacaaccagctagcaatggctgctcagctgcaagcagtg
caggcatgggctgttgaacataacattgatctttcagtgcctggaaatgtcaatttggtt
gcacagctcattccacttgtgcagtctaggttggctggacagcagaaagcaaatgaaagc
aatatgggagcacaatcatcacctgttccagtgtcaaagcagcaggttacttctccgcaa
gttgctagtgagaattctcctcatgctaattcatccagtgatgcttctgggcagtctggc
tcagcaaaagcaaagcaggcagtatcatctggaccttttggctcttcttcaaatgctggt
agtgttaataatagtaacaacattccaatgcagcagtttcctgttcatggtagagagaat
caagtggcatttagacagcctgctgtaactggtaatggaattcctatgcaatcacaagga
aacattaaccaaggtgttgatcaatcccttcatgctaaaaatccattaagtagcccagaa
agtatgcaaatgcaatatagtaggccagtgaatcgatcctctcctcaagcttctgtttct
atgaatgagagagcttctggaactccagtgcaagcacaaggtggaccatctactcacgcg
tcacaacaacgacctggtccttctgggttcaccaaacagcaactgcacgttctcaaagca
caaatactggcatttcggcgattgaagaaaggagaaggtacactcccccaagagcttctt
agagctattgctccacctccacttgacttgcagcagcagccacagcagcaaaataatgcg
gtaggagtaagcgtgcaggataaatctgctgggaaggttgtagcagaccgtgtaagacat
atggagtccagtgaaaaggatacgcaggcagctgcagctatgaatgggcagactgtttta
aaggaggaacctttcacaagagatgagaaatcaaatgcagcagcagttcatgcacaaggt
acgtcagctatggttaaggaacctcccgtacctgtggtttcttcgggaaaagaagagcag
caacccactgtcttctctgctaagtcagaccacgaagttgaacgtggtacctcaaaagct
cttgttagaagtgattcagtggatagaggaaaggcggttgcagctcatgttcctgtatct
gatgcaatgcaagctaaaaagcccacacaagcaagcactgctccccaaccaaaagatgtt
ggttctgctagaaagtaccatggaccactatttgatttcccttttttcactaggaaacat
gactcgttgggtccaggtacgatgaatagcaacaataataacaatctaacacttgcatat
gatgtgaaagatcttctttttgaggaaggtgtggaagtgcttaacaagaagagaacagaa
aatataaagaaaattggtggtttacttgctgttaatttggagaggaaaaggattagacca
gaccttgttctgcggttgcaaattgaagagaagaagcttcgacttttagatatacaggca
cgtttgagagacgaaatcgatcagcagcagcaagagataatggctatgcctgataggcct
tatcggaagtttgtcagactttgtgagcgtcaacgcatggagcttgctagacaagtacaa
gcctctcaaaaagcccttagagataaacaacttaaatccatctttctttggcgtaagaaa
cttcttgaggctcactgggctattcgtgatgcacggactgctcggaacaggggggttgcc
aaatatcatgaaaagatgttgagggagttctcaaaaaggaaggatgatgatcgaaacaaa
aggatggaagcattgaagaataatgatgttgaaaggtatagggagatgttgcttgagcaa
cagaccagcattgacggtgatgctgcagagagatatgcagttctttcatcatttttgact
cagacagaagattaccttcataaactgggaagtaaaataacagctgccaagaatcaacaa
gaagtggaggaggcggctaatgctgctgcagctgctgcacgacatcagggtctctcggaa
gaagaagttagagcagcagcagcatgtgctggggaggaagtattgataagaaatcgtttt
atggaaatgaatgcacctaaggatagctcctccgttagcaagtattatagtcttgcacat
gctgtgaatgaaagagtcataaggcaaccctctatgctgcgcaaaggaacattaagagac
tatcagcttgttgggttgcaatggatgctttcattatataacaacaagttaaacggaatc
ttagcagatgaaatgggtctcgggaagactgtacaggtaatggcattaattgcttactta
atggagttcaaagggaattatgggccacatctcataattgttcctaatgctgttttggta
aactggaagagtgagctgcatacctggttgccatctgtgtcttgcatatattatgttggt
agcaaagatcagagatcaaaattattttcccaggaggtctgtgccatgaaattcaatgta
cttgtgacaacttatgagttcatcatgtatgatcgctcaaagctttctaaaatagattgg
aagtacattataattgatgaagcacagaggatgaaagatagggaatcagttctagctcgc
gatcttgataggtatcgttgtcagaggcgtcttcttcttactgggacaccattacagaac
gatttgaaggaattgtggtcacttttgaatctacttctccctgaagtgtttgataatagg
aaggcatttcatgattggttctcaaagccatttcaaagagaagctcctacacagaatgca
gaagatgactggttagagactgaaaagaaagtcataatcatccatcggctccaccaaatt
ttagaaccattcatgctccggcggcgtgttgaggatgtcgagggttcccttcccccgaag
gtttcaattatattaaaatgtagaatgtcggctattcagagtgctatttatgattggatt
aaatctactggtactattcgagttgatccagaagatgagaggcggagggttcaaaaaaat
ccaatttatacagctaaggtgtataaaacgttaaataacaggtgtatggaactacgtaaa
acctgcaatcatccattgcttaattatccatattacagtgacttatccaaggaattcatt
gtaagatcttgtggaaaactgtggattatggatagaatccttatcaaacttcagagaaca
ggacatcgagtacttctcttcagtaccatgacaaaactccttgatatattggaggaatac
ttgcagtggcgaagacttgtatatagacgaattgatggcacaactagtttagaagatcgt
gaatcagccatagtggactttaatagccctggttcagattgctttatcttcttgcttagt
attcgtgctgctggtcgagggcttaatcttcagtctgctgatacagtaatcatatatgat
cctgacccaaaccctaaaaatgaagaacaggcagtagccagggcccatcgtattggacaa
acaagagaagtcaaagtcatatatatggaagcagttgttgacaaaattcctagccatcaa
aaagaggatgaactgagaaatggaggtacagttgattcagaggatgaccttgccggtaag
gatcggtatgtgggatccattgagagcctcattagaaacaacattcagcagtataagatt
gacatggctgatgaggttataaatgctggtcgctttgaccagagaaccactcatgaagag
agacgcatgacattggagacattattgcatgacgaggagagatatcaagaaaccgttcat
gatgttccctccttgcaagaggttaatcgcatgatagctagaagtgaagaagaagttgaa
ttgttcgatcaaatggatgaagaatttgattggattgaggaaatgactagttatgaccag
gtccctaaatggcttcgtgttggtacacgggaagttaatacaaccgttgcaaatttatca
aaaagaccatcaaagaacattttgtttggtgggaacgttggagtgggatccaatgaagtg
ggctctgattcatccccaaaaactgagaggaggaggggacgaccgaaggggaaaaagcat
ccaaattacaaggaattagatgatgacaatggtgaatactcggaagcaagttctgacgag
agaaatggatattctttgcatgaagaagaaggagaaattggggagtttgaggatgatgaa
tttggtggtgctgctgcggcacccgaatgtaataaagaccaagtagaagaagatggtcca
acttgtgatggtgtatttgagtatcctcgaacttcagaaggtgttagagttaaccataca
gtagaagaagctggctcctcagggtcatcttcagacactcgaaaagtgacaaggatagtg
tctccagtttcctcgcagaaatttgggtcactatcagcgttagatagtagacccggttct
gcatcaaaaagacttacagatgaattagaggagggtgaaattgctgtatctggagattca
cacatggatcaccaacaatctggaagttggattcatgaacgtgaggaggctgaagatgaa
caggttttacagcccaagataaagaggaaacgtagtcttcgtattcgcccccgtcacaat
gtggaaaggccagaagagaaatccagtaatgagacatcttccctacaccgtggagatttg
tctcttcaacgtggagattcatcactgttgccatttcaggaccacaagaatgtgacacag
ttacgaggtgacccggacatcaaatcctatgcagattccaattctttgaggcatgaacaa
aatgaatccttgaaaactaggcggaatctgccttcaaggagaatagcaaatacagcaaaa
ttgcatgcctcaccaaaatcttctcccaagtctggtagtagcagattgaataacatgtct
gcttctgtagatgatgctactgagcatcttagagacaattgggatggaaaagttggaaat
tctagcggtactactgttttgggctctaagatgcctgagatcatccagagaaggtgcaag
aatgtgataagcaagcttcaaaggagaatagataaggaaggacctcaaattgtacctttg
cttacagatttgtggaagcggattgagaatactggctacacaactggatctgggaataat
cttttggatttaagaaagattgatcagcgtatagagaggttagagtataacggtgttatg
gagctggtatttgatgtgcagtctatgttgagaagtgcaatgcattattatgcgttctca
catgaggtacgaactgaagccaggaaagtacatgatttgttcttcgatatcttgaaaatt
gcattccatgacacagaatttcgagaagctagaagtgctctttcattttctagcccagtt
tccacaactgctgctccttcacctaggccagctgctgctgttttaagcaagagacagaag
atgataaatgaggtggaacctgacccaagccccctacagaagccgcagcaaaggggacct
gtatacaatagtgaagaatccaggatgagaagccttgtgtcacagaaagaactgagacat
ggtagtggcagtggcagagagcaaattcagcaagatgattctcctcgtcctgctcatcct
ggggatctcgttatttgcaagaagaaaagaaaagacagggaaaagtctctggcgaaggtt
aggactgggtcggttggccctgtttcaccccccaacatgactcgtggtattaaaagcccc
ggttctgtttccgttaccagagacacaagactaactcaacaagccactcattctccaggg
tgggctaaccagtctgctcaaccttcaaatgggggtggagggtctgttggttgggcaaac
ccagttaagaggttgaggacagattctgggaagaggaggccaagccatctatga

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