| Entry |
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| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
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| KO |
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| Organism |
csav Cannabis sativa (hemp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csav00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115706522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csav03019]
115706522
03036 Chromosome and associated proteins [BR:csav03036]
115706522
Enzymes [BR:csav01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115706522
Messenger RNA biogenesis [BR:csav03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115706522
mRNA degradation factors
5'-3' decay
Decapping complex
115706522
Chromosome and associated proteins [BR:csav03036]
Eukaryotic type
Gene silencing
piRNA pathway
115706522
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(37046485..37051514)
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| AA seq |
514 aa
MNNNNNNRGRYPPGIGAGRGGPMNANPAFQSRGPQQQYVQRGLVQNQPQYFHHQQQQHHQ
QQQQQYHQQQQQQQQQQQQQQQWLRRGQLGGVADSSADEVEKTVQSEAVDSSSQDWKARL
KIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDI
LARAKNGTGKTAAFCIPALEKIDQDLNAIQVVILVPTRELALQTSQVCKELGKHLNIQVM
VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCAMLVMDEADKLLSPEFQ
PSIEQLIGFLPGNRQILMFSATFPVTVKDFKDRYLQKPYIINLMDELTLKGITQFYAFVE
ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF
HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNL
ITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR |
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| NT seq |
1545 nt +upstreamnt +downstreamnt
atgaacaataataataataatagagggaggtaccctccggggattggtgccggtcgaggc
gggcccatgaacgcaaatccggcgtttcagtctaggggacctcagcagcagtacgtgcag
agaggtttggttcagaatcaaccccagtattttcatcaccagcaacaacagcaccaccag
caacagcagcagcaatatcatcaacagcagcagcagcagcagcagcaacaacaacaacaa
cagcaatggctgaggagaggtcaattgggtggagttgctgattccagtgctgacgaggtc
gagaagaccgtacagtcggaggctgtggactccagttctcaagattggaaggcaagattg
aaaataccaccagctgatacccgctacagaacagaggatgtgactgcaactaaaggaaat
gagttcgaggactatttcctgaaacgtgaattgctgatgggaatatatgagaaagggttt
gaaagaccatcccctattcaggaagagagtataccaattgctcttactggtagtgatata
cttgctagagccaaaaatgggactggaaagacagctgcattttgcatccctgccttggaa
aagattgatcaagatttaaatgcaatacaagttgtaatacttgtcccaacacgtgagctg
gctcttcaaacatcacaagtctgtaaggagctcgggaagcatttgaatattcaagttatg
gttacaactggtggtactagcttaaaggatgatatcatgcgtttatatcaacctgttcat
ttgcttgttggaacacctggaagaattttagatctttcgaagaagggtgtttgcatcttg
aaagactgcgctatgcttgttatggatgaggctgataagctactgtcaccagagtttcag
ccatcaattgaacagctgattgggtttttgcctggaaacaggcaaattttaatgttttca
gctacattccctgtcactgttaaggatttcaaggatagatatcttcaaaagccttatatt
attaaccttatggatgagcttactctaaagggtattacacagttttatgcatttgttgaa
gaacgacagaaagttcactgcctgaacactcttttctccaagcttcaaataaaccagtca
attatcttctgcaattctgtaaatcgagtagaactgctggccaagaaaattacagaactt
ggctattcttgtttttatattcatgcaaagatgctccaagatcaccgtaacagagtattt
catgacttccgtaatggtgcatgcaggaatcttgtttgtactgatttatttactagagga
atagacatacaagcagtcaatgttgttattaactttgactttcccaagaactcggaaaca
tatctgcacagggttggtcgatcaggaagatttggacatcttggtttagctgtgaatttg
atcacatatgaagaccgcttcaacttgtataggattgagcaggaacttggcactgagata
aagcaaattccaccgcacattgatcaggcaatttattgccgataa |
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