Cannabis sativa (hemp): 115706548
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Entry
115706548 CDS
T08987
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03030
DNA replication
csav03410
Base excision repair
csav03420
Nucleotide excision repair
csav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115706548
03410 Base excision repair
115706548
03420 Nucleotide excision repair
115706548
03430 Mismatch repair
115706548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115706548
03036 Chromosome and associated proteins [BR:
csav03036
]
115706548
03400 DNA repair and recombination proteins [BR:
csav03400
]
115706548
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115706548
DNA Replication Termination Factors
ELG1-RFC complex
115706548
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115706548
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115706548
Check point factors
HRAD17(Rad24)-RFC complex
115706548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
Mg_chelatase
AAA_5
AAA_11
AAA_14
AAA_24
AAA_assoc_2
SLFN-g3_helicase
AAA_2
ResIII
PhoH
nSTAND3
AAA_30
AAA_19
AAA_28
CPG4
AAA_7
RNA_helicase
AAA_25
Parvo_NS1
NPHP3_N
MCM
bpMoxR
IstB_IS21
DNAX_ATPase_lid
DUF815
TIP49
AAA_18
NB-ARC
Motif
Other DBs
NCBI-GeneID:
115706548
NCBI-ProteinID:
XP_030490093
LinkDB
All DBs
Position
1:37153634..37164243
Genome browser
AA seq
342 aa
AA seq
DB search
MATLMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSVQRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT
SRVLYICNEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISSRDLIGVSGVI
PLEVVEAFFTACKSGNFDLANKEVNNIIAEGYPVSQMLSQLFDMVVEAADVSDEQKSRIC
KKLGEADKCLVDGGDEYLQLLDVASNTMRALCNMPEEFSYSN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctacattgatgcaaagctctcagccatgggtcgagaaatatcgacctaagcaagta
aaagacgtggctcaccaggatgaggtggtccgggtcctcaccaacaccctcgaaaccact
aattgtccccacatgctcttctatggccctcccggcaccggtaaaacgaccaccgctcta
gccattgctcaccagctttttggacctgaactatacaagtctagagtgctggagcttaat
gcaagtgatgaccgtggtatcaatgttgttcgaacaaaaatcaaagattttgctgctgtt
gctgtgggttctgtccaacgtcaagggggatacccttgtccaccttataagatcattatc
cttgatgaggctgattccatgactgaagatgctcagaatgcccttagacgtacgatggaa
acttactccagagtcacaaggttctttttcatatgtaattacatcagcaggatcatagag
cctcttgcgtctaggtgtgcaaagttcaggttcaagccactttcagaagaagtcatgact
agtcgtgtattgtacatttgcaatgaagaaggtctgaatttggattcagaggctctttca
actctaagttctatttcacaaggtgatctgcggcgggctattacatacttgcagtcagca
gctcgcttgtttggatcttcgatttcttccagggacctgattggtgtttctggggtcatt
ccacttgaggttgttgaggcttttttcacagcttgcaagagtggtaactttgatttggca
aataaggaagtcaataacattattgcggagggctatcccgtctctcagatgctttcacag
ttatttgacatggttgttgaagcagctgatgtatcagatgaacagaagtctagaatatgc
aagaaattgggcgaagcagataagtgtcttgttgacggtggggatgagtacttgcaactg
cttgatgtggctagcaacacaatgcgtgctctttgtaacatgccagaagaattctcttat
agcaattag
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