Cannabis sativa (hemp): 115706647
Help
Entry
115706647 CDS
T08987
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
csav
Cannabis sativa (hemp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
115706647
NCBI-ProteinID:
XP_060958237
LinkDB
All DBs
Position
1:complement(1479282..1488277)
Genome browser
AA seq
1144 aa
AA seq
DB search
MWSGGGSSSSSSTITPEQRARITRNFRAAKALLSRKRPRNDATLSPLCKKVWDENEGMET
PIRGFSTINRVPLADIPVNTPPRFAGHTSSFIGHEKHISVSRSKDVSLGNVCEVNSFTTP
LKQSACPKSSTDSFSVTSFISGVDDDDDDFDESILEEIDALCEQKSMERTGRSDPSSNSI
VTSEHSDGKGDGVGDPNASSVELENMGIFGFGNDGIGECKEENGLSNTQSIKIGSMPSEF
SKYMLSLNDRQREAACCEISKPLMIAAGPGSGKTSTMVGRVLMLLHERISPSNILAMTFT
TAAASEMRERIGKVAGKAVAKELTISTFHSFSLQLCRSYAEKIERTSDFLIYGHAQQRRA
VIEAVRIFENGKSNKKIDSRILGEEANGITSPQYFKDMSKRWQKFVTQAKASGKTTAECF
KMGDEMGATILGNYNDILKSCNALDYHDLISCSVKLLTDYPEVFRECQESWKAIVIDEFQ
DTSAMQYSLLKMLSSHNHITIVGDDDQSIFSFNGADNSGFDSFRKDFPNYKEVRLNKNYR
STRYIVEAASFVIQNNIKRCRLKNVDTDNSCGSKVIIKECHSEDAQCSFIIDKIFESATI
DSTAKCSYGNIAILYRRQVSGKVFQTAFRERKIPFNVHGVAFYRKKVVRAIIAMLRTTLP
GCDDGSYRRVFKALLPSEKEEKKRVIEHIDKISTVRKCSFISAACDIFSAKVSGTFKRSQ
LTQGRKVLITLEMISKLVNREQSISAVITSVANMVPQKYLLEQRAVVDVDAGKYLNEDND
IRSVLQFLLDDVSEFLSTRCVPPEREKDLAEEKGCHSALKAFVDLITERETENFRSRRED
NKNSVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGAAKENGTSVEEERRLFYVAMT
RARKKLFVLYVSMDSSFQILRPSRFLNEIPEHLREVQGELSVQLQNKHRDCSKSTDQVMV
GPHSKLESIETDTNPDDLVQIKVKDDQVEFVESMEAGNGNIFLKRFDMEERSIVSHVFHQ
WAKKKAFQDPKRLLDKVGFVIDERLRVKNNKHKDVLRLLKSFLKCDEAFQFAEYVLRWEQ
IPAERRAHLMREKQEHFLKLKIENSMGSSAPTAKQISYLQSLGCTVAPTSRLHASHLIEQ
YKSL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcggcggtggatcatcatcatcatcatcgaccattacgccggagcaaagagcc
agaattacccgcaatttcagagccgccaaagctctcctttctcgtaaacgccctcgaaac
gacgccactttatcccctctttgcaaaaaagtctgggatgaaaacgaaggcatggagacc
ccaattaggggtttcagcactatcaatagagttcctcttgccgacattccggtgaatacg
ccgccccgttttgctggtcacacctcttcgtttattggccatgaaaaacatataagtgtt
agtcggagtaaagatgtttctttaggaaatgtgtgtgaagtgaattcgtttacaacccct
ttgaaacaatcggcatgtccgaagtcatctacggattctttttctgttactagttttata
agtggagttgatgacgatgatgatgattttgatgagtccattttggaagaaattgatgcc
ttgtgtgagcagaaatccatggaaagaactggaaggtcagacccaagttccaattctatt
gtcactagtgagcatagtgatggtaagggtgatggtgttggtgatcctaatgccagctct
gtggagttggaaaatatgggtatttttggatttggaaatgatgggattggggaatgcaaa
gaagaaaacgggttgtctaatacacagagcataaaaattggaagcatgccaagtgagttt
tcgaaatatatgttgtctttaaatgacaggcaacgtgaagctgcttgctgtgaaatttct
aagcctttaatgattgctgctggccccggaagtggaaagacttcaacgatggttgggaga
gttcttatgctgcttcacgagagaattagtccatcaaatattttggcaatgacttttact
acagcagcagcttctgagatgagagaacgtattggaaaagtggccgggaaagcagtagct
aaagaacttacaatcagcacattccattctttttccttgcagctttgtcgatcatatgca
gaaaagattgagcgcacatcagatttcttaatatatgggcatgcacaacaaagaagagcc
gttatagaagctgtgcggatattcgaaaatggaaagagtaacaaaaagattgactctcgg
atattaggtgaagaggctaatggtataacctctccacagtattttaaagatatgtcaaag
agatggcagaagtttgtgactcaggctaaagcttctggaaagactactgcagagtgcttc
aaaatgggtgatgaaatgggggccacgattcttgggaactacaatgatatattaaagtct
tgtaatgctttagactaccacgacttaattagctgttctgtgaagctgcttactgattat
cctgaagtattcagggagtgtcaggagtcctggaaagccatagtaattgatgagtttcaa
gatacaagtgctatgcaatacagtcttcttaaaatgctttcatctcacaatcacataact
attgttggtgatgacgaccagtctattttcagtttcaatggagctgataattctggattt
gattcatttcgtaaagattttccaaattacaaggaggttagactgaataagaactatagg
tccactcgttatattgttgaggccgcatcctttgttatacaaaataatattaagcgatgc
cgattaaagaatgttgacaccgacaattcatgtggatcaaaggtaatcatcaaagaatgt
cacagtgaggatgcgcaatgctctttcatcattgacaagatttttgaatctgcaactatt
gattcaactgctaagtgctcctatggaaatattgcaattctttaccggaggcaggtttcg
gggaaagtcttccaaacagcctttcgagaacgaaaaataccatttaacgttcatggtgtg
gccttttataggaaaaaggtagtccgggcaattattgctatgcttagaactacattgcca
ggttgtgatgacggatcgtatcgtcgagtcttcaaggccttacttccttctgaaaaagag
gaaaaaaagagggtaattgaacatattgacaaaatctcaactgttagaaaatgcagcttt
atttcagccgcttgtgatatctttagtgcaaaagtttccggaacctttaaaagaagtcag
ctcacacaagggcggaaggtgttgataacgctggagatgatttcaaagctagttaacagg
gaacaatcaatttcagctgtcattacctcagtggcaaacatggtacctcagaaatacctt
cttgagcagcgggcagttgttgatgtagatgcaggaaaatatctcaatgaagataatgat
atcagatctgttcttcagttcctcttggatgatgtatctgaattcttatctactagatgt
gtaccaccagaaagggagaaggatctagcagaagagaaaggctgtcatagtgcacttaag
gcttttgtagatcttataaccgagagggagacagaaaattttcgttctcgtagagaggat
aacaaaaattctgtcaccttaactaccatccatcagtcgaaagggttggaatgggacact
gttttcatagttaaggcaaatgaatctgagattccattactccatgaattcaatggtgca
gcaaaggaaaatgggacctcagttgaggaggaacgtcgtttgttttatgttgcgatgaca
cgtgcccgaaagaaattgtttgttctgtatgtttcaatggattccagtttccagatactc
cgaccttcgcgatttctcaacgaaattccagaacatcttcgagaggtccagggtgaacta
agtgtacaactacaaaataagcaccgtgactgctcgaaaagtaccgaccaagtcatggtt
ggtccacatagcaaattggaatcaattgaaacagatacaaatccagatgacttggtccaa
atcaaagtgaaagatgatcaagttgagtttgtagaatccatggaggcaggcaatggaaat
attttcttgaaaagatttgatatggaagagagatcaattgtatctcatgtatttcatcag
tgggctaagaagaaagcatttcaagatcctaagaggttgcttgataaggttggctttgta
atcgatgagcgcctacgagtaaagaacaacaagcacaaggacgtcttgcgcttgctaaag
tcattcttgaaatgtgatgaagcatttcaatttgctgagtatgttttaagatgggaacaa
atccctgctgaaaggcgtgctcatttgatgcgggaaaaacaggagcatttcctgaaatta
aagattgagaactcaatgggttcatcagctccaacagccaaacagatttcttatctgcaa
agtttaggctgcactgtggcccctacatcacgtctccatgcttctcatctgattgagcaa
tacaaatcattgtga
DBGET
integrated database retrieval system
