Cannabis sativa (hemp): 115706820
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Entry
115706820 CDS
T08987
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115706820
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
115706820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
PQQ
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
115706820
NCBI-ProteinID:
XP_030490427
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Position
1:complement(38594335..38596555)
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AA seq
479 aa
AA seq
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MRKTPCFERLLKTNQTIIMQFSFCHHLYTITISFLLFHSLKHCQPTNLKKKKKKMSSSSS
SSSSSLEVILTSSPDGPIIAYDASSGTAVTQFSTSRSPRRGLTIVGKTSIAASHISPITA
SGSIHLYNWWCSAAFHKLPVPELVAPLTATQDGSYLFAGGLSGNVYTLSVASGDILNSLP
AHTGPVSCLTISEDGSLLISGSDDGTIVLTPIFQLLGSAKQVTNNLTQHKFSAHSGSVTA
ILSCTRLCNSQIISCSTDSTCKFWSLNRGTHLRTVVFPCSVLGITVNPSESYFYAAGSDG
SIYKGSIRIGNRKIPSNGTEEELVRWAQNHHNEAIVSLAMVNNGRNLVSASEYGNVWVWE
SENGQVVSGLGNEMRVGISDLVVASGIRSGKDIVLGNGMGLGYEYGSFGSEGVRCLNVKE
TMEMEDMMAVAEKDRSRAIGMLESAIAMYERLLELILKEAKEAATCTTEVTKQERESDT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacaccttgttttgaacgcctattaaaaacaaaccaaaccataatcatgcaa
ttctcgttttgccaccacttgtatactataactatttcattccttttattccattctctt
aaacattgtcagccaacaaacttgaagaagaagaagaaaaaaatgtcatcttcatcttct
tcttcctcttcttcacttgaagtcatcctcaccagctctcctgatggccccatcattgca
tacgatgcttcctctggcacggctgtaacccagttttcgaccagcagatcaccccgccga
ggcctcaccatcgtcgggaaaacttccattgcagcatcccacatctctcctatcactgct
tctggctcaattcatctctataactggtggtgttccgcagcttttcataagctccctgtc
cctgaacttgtggctcctcttactgctactcaggatggttcttatctctttgctggtggc
ctttccggcaacgtatatacactctcagtcgcttcaggggatatcctcaattcacttcct
gctcatactggaccagtttcttgtcttactatcagtgaagatggctcacttctgatctca
ggaagtgatgatggcaccattgttctcacaccaatcttccaacttttggggtcagcaaaa
caagttacaaacaatttaacacagcacaagttttcagctcattccggttcagtcactgcc
attctttcctgtactagattatgcaactcccagatcatttcatgctcaacggattcaaca
tgtaaattttggagcctcaaccgaggtacccatctaagaaccgtggttttcccttgctct
gttctgggaatcactgtaaacccatcggaatcatatttttacgccgcgggctcagatgga
tcgatctacaaagggtcaatcagaatcgggaatagaaaaattcccagtaatggaacagag
gaagagctggtgagatgggctcagaatcatcataacgaagcaatcgtatctttggcaatg
gtgaataacggaaggaatcttgtatcggcttctgaatatgggaatgtttgggtttgggaa
tctgaaaatgggcaagtggtttcgggtcttgggaatgagatgagagttggaataagtgac
ttagtggtggcttcgggaattagaagcgggaaagatattgtgttagggaatggaatggga
cttgggtacgagtatgggtcgtttgggagtgaaggggttagatgtttaaatgtgaaggaa
acgatggaaatggaagacatgatggcggtggcagagaaggatcggagcagggcaattggc
atgttagagtccgccattgctatgtatgagaggcttttggagcttattcttaaagaagcc
aaagaagctgcaacttgcactacagaagttactaaacaagaaagagaaagtgatacataa
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