KEGG   Cannabis sativa (hemp): 115706843
Entry
115706843         CDS       T08987                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03020  RNA polymerase
csav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115706843
  09124 Replication and repair
   03420 Nucleotide excision repair
    115706843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csav03021]
    115706843
   03400 DNA repair and recombination proteins [BR:csav03400]
    115706843
Transcription machinery [BR:csav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115706843
  RNA polymerase III system
   RNA polymerase III
     115706843
  RNA polymerase I system
   RNA polymerase I
     115706843
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115706843
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N PBECR4 DUF1653
Other DBs
NCBI-GeneID: 115706843
NCBI-ProteinID: XP_030490456
LinkDB
Position
1:65416562..65418435
AA seq 200 aa
MGIDDEEITWLFCIRRTLMQMLRDRNYLVEDCEINMTKQQFIDANHAQKMRKYPTTLYFT
AAKRNDDSDQKICVFFSAEKDSSGVDKMLRPSMKAIVVFKEKLPNINKLRRQCGAEIFQE
EELLVNVTEHALVPKHEVLTEEEKKALLEFYNISDSQLPWIRTTDPIARYYGLRRGQVVK
ITRHSELEGQSVIYRCCSHS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggtatagatgatgaagagataacatggctattctgtataagaagaacactgatgcaa
atgcttagggatcgaaactatttagttgaagattgtgaaatcaacatgactaaacaacaa
ttcatcgacgccaatcatgcccaaaaaatgaggaaatatcctaccaccttatacttcact
gcagcaaaaaggaatgatgactctgatcagaagatttgtgtttttttctccgctgaaaag
gatagtagtggcgtggacaagatgcttaggccatctatgaaagcaatcgtagtttttaaa
gaaaaattgcctaatattaataaattacgtagacagtgtggcgctgaaattttccaggaa
gaagaattgttagttaacgtaacagagcatgctcttgttcctaagcatgaggttctaaca
gaggaggagaagaaggctttgttggagttttacaacatttcagattcacagcttccatgg
ataagaactactgatccaattgcaagatactatgggttaaggcgtggacaagttgtcaag
ataactcggcatagtgagcttgaaggccaatctgtcatctaccgatgttgtagccactcc
taa

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