Cannabis sativa (hemp): 115706921
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Entry
115706921 CDS
T08987
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115706921
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115706921
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
115706921
NCBI-ProteinID:
XP_030490553
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Position
1:48296458..48299636
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AA seq
406 aa
AA seq
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MRINMNMRMHMWCLLKMMLVLLVLEYSGGAEGASYNINVVSFGGRSDGKTDSTKAFAKAW
SWACSARANTVTLYVPRGTFVIKSLVFSGPCRSRIVFQIDGTLLAPSNYWDLGSSGHWIL
FSKVNRMSIHGRGTLDARGHAFWACRRSSHAKCPPGARSISLSWCSNIVVNGITSLNSQT
IHISMDHCKNVVIRKVYIRAPSSSPNTDGILLQASTGITVSRSTIMTGDDCVAIKSGCSN
VWIEGSNCGPGHGISIGSLGDSSNESGVQNVTVTSCTFTKTQNGVRIKTWAKPSNGYATN
IHFRNLVMNNVDNPIIIDQGYCPGGGGGCPRHSSGVRITKVTYSNIKGTSATKVAVRLAC
SPTNPCYGIKLLNVKLLYLKKSPASLCAYARGSSSGVVIPRSCLTK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaatatgaatatgagaatgcatatgtggtgtttattaaagatgatgttggta
ttattagtattggaatattcagggggggcagagggtgcgtcgtacaacatcaacgtggtg
agctttggtggaagatcagatggcaaaacagattcgaccaaagcattcgcaaaggcatgg
tcatgggcatgctcagcaagggccaacaccgtcacactctacgttcccaggggtactttc
gtcattaagagcctggtgttcagtgggccctgcaggagtagaatcgtgttccagatcgat
ggcactctcctggctccttccaactactgggacttgggctcctctggccattggatcttg
ttcagcaaggtcaacaggatgtcaatccacggccgtggcactcttgatgccagaggacat
gctttctgggcttgccgcagatcttcccacgctaaatgtccaccaggagcaaggtcgatt
tctctttcgtggtgcagtaacatagtggtgaatgggataacatccctaaacagccaaacc
atacacatatcaatggaccattgcaagaacgtggtgattcgaaaggtgtacataagagca
ccaagctcaagccccaacacagacggcattctcctgcaggcatcgacgggcatcacggtg
agccggtcaaccatcatgacaggggacgactgcgttgcaatcaaatcggggtgcagcaac
gtgtggatagaaggaagcaactgcggaccagggcacggcatcagcataggcagccttggg
gactcatccaacgaaagcggagtacagaatgtgaccgtcacgagctgtaccttcacaaag
actcaaaacggggtgcgcataaaaacgtgggccaagcccagcaacggctatgccaccaac
atccacttcagaaaccttgtgatgaacaatgtggacaaccccatcatcatcgaccagggc
tactgccccggcggtggaggtggctgtcctcgccattcctctggtgttaggatcaccaaa
gtcacttacagtaacataaagggtacttcggctaccaaggttgctgtgaggttggcttgt
agcccaaccaatccatgttatgggatcaaacttctcaatgttaaactcctttatctcaag
aaatcaccagcttctctttgtgcttatgctcgtggctcttcttccggagtagtcattcca
aggagttgtctcactaaataa
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