Cannabis sativa (hemp): 115706927
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Entry
115706927 CDS
T08987
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115706927
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115706927
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115706927
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115706927
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115706927
Ion channels [BR:
csav04040
]
Chloride channels
Chloride channel (CLC)
115706927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
115706927
NCBI-ProteinID:
XP_060962822
LinkDB
All DBs
Position
1:27122260..27126223
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AA seq
774 aa
AA seq
DB search
MEAHGDDHGGGEVWSEISVSISDDKSFSTSTDQPPLPLVKLENTTSQIAIVGSNLYSIES
LDYEIVENELFKHDLRSKKKVKIFQYVLIKWTFALLIGLGTGLVGFLNNIAVENISDFKL
LLTTDLMSKKQYYKAFAAFTGCNVGLAVAAGALCAYIAPAAAGSGIPEVKAYLNGVDSHS
ILAPSTLFVKIFGSILGVSAGFVVGKQGPMVHTGACIASLLGQGGSRKYHLTWSWLRYFK
NDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRAFFTTAIVAIVLRA
FIQFCSTGKCGLFGLGGLIMYDVSSAAAIFNAPDILAVIFIGITGGFLGSLYNYLVNKVL
RAYKIMNGKGAVTKILLVMTIAILTSCCSYLLPWSAKCIPCPEGITVSCHNVKSGNYKAF
QCPPGHYNDLASLFLNTNDDAVRNLFSTRTKKEFQISSLFIFFAAVFFLGIVTYGIAIPS
GLFIPVILAGACYGRLVGRLFETISHLDTGLFALLGAASLLGGTMRMTVSMCIILLELTN
DLLLLPLVMLVLLISKTVADNFNIGVYDQIMKIKGLPYMEANPEPYMRHLVAGNVVSGPL
VAFSGIEKVGNILFALRTTNHNGFPVIDEPPFSDSTELCGLVLRSHLLVLLRGKNFTKER
VMCGREIQGMFSAFDFAKAGSGKGIKLEDIDIKEEEMEMYVDLHPITNTSPYTVVDSMSL
AKAAVLFRQLGLRHMCVVPRSKGKHPIIGILTRHDFMAEHILGRYPDMDPHKQK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcatggagacgatcatggtggtggtgaggtgtggtcagagatatctgtgtct
atctctgatgataagagcttttccactagtactgatcagccccctttgcctttggtcaaa
ttggaaaacaccacttcccaaattgccatagttggctccaatctctactccattgaaagt
cttgactatgagattgttgaaaatgaactgtttaagcatgatttgagatcaaagaagaag
gtgaaaatatttcagtacgtactaatcaagtggacatttgcccttctcattggactcgga
actggactagttggctttttaaataacattgcagtcgagaatatttcagattttaagctc
ttgctcactactgacctcatgtcaaagaaacaatactacaaggcttttgcagcatttact
ggttgcaacgttggtttagcagttgcagcaggtgctctatgtgcttacatagctccggct
gcagcaggttcgggtattccagaggtcaaagcctatctcaatggtgttgattctcattca
atacttgctccaagcaccctctttgtcaagatttttggatccattttgggagtgtctgca
gggtttgtggtgggtaaacaagggcctatggtacatactggggcttgcatagcctcgctg
cttggacaaggaggttcgcgcaagtatcatttgacatggtcgtggctgagatacttcaag
aacgatagggatcgacgagacttgatcacttgtggtgctgctgctggtgtagctgcagca
tttcgtgcccccgttggtggtgttctgttcgcccttgaggaggctgcttcttggtggcgc
aatgctcttctttggagggcatttttcacaacagcaatagttgctatagtgttgagagct
tttatacaattttgctctacgggaaaatgtggtctattcgggctaggaggtctgatcatg
tacgatgtaagctcagctgcagcaatatttaatgcccctgatatcttggctgtgatattc
attggtattactggaggattccttggcagtctctacaactaccttgtgaacaaagttctt
cgagcttataaaattatgaatggaaaaggtgctgttacgaaaatcttgctggttatgaca
atagccattttaacttcatgctgctcttacttgttgccttggtctgccaagtgcatccct
tgccctgaaggcattacagttagctgccataatgttaaatctggaaactataaggccttt
cagtgtccaccgggccactacaatgatcttgcctcgctctttttaaacaccaacgacgat
gctgttcgcaacctcttcagtacccgcacaaaaaaagagttccagatatcctcactcttc
atcttctttgcagctgtattcttccttggaatcgtaacttatggaatagctattccctct
ggccttttcatcccagtcatacttgctggagcttgttatggccgacttgttggaagactc
ttcgaaacaatctctcacttggacactggtctctttgcgttacttggtgcagcctctttg
ctcggcggcaccatgagaatgacagtttccatgtgtatcatactgcttgaacttaccaat
gatctattgctgctccctcttgtgatgcttgttcttctaatatctaaaactgtggctgat
aacttcaacataggagtatatgaccaaatcatgaaaataaagggattgccttacatggag
gctaatcctgagccttacatgaggcatttggttgctggtaatgttgtttcaggtccattg
gtcgccttttctggcatcgaaaaggtgggaaacatactatttgctctgaggacaacgaat
cataatgggtttcctgtgattgatgaaccacctttctcagactctacagagctgtgtggt
ctagtgttgaggtctcatttgcttgttttgcttagggggaagaactttaccaaggaaaga
gttatgtgtggtagagagatacaaggaatgttttctgcatttgattttgcaaaagcagga
tcagggaaaggaatcaaattggaggacattgatattaaagaggaggagatggagatgtac
gtggatcttcatcctattacaaacacatctccatacacagtggttgattcaatgtcactt
gccaaagctgccgttctctttcgccaacttggtctcaggcacatgtgcgtggtgccaagg
agtaaagggaaacatccaattattggaattttgacaaggcacgacttcatggcagagcac
attttggggaggtatcctgatatggatcctcacaaacaaaagtaa
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