Cannabis sativa (hemp): 115706958
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Entry
115706958 CDS
T08987
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115706958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115706958
03110 Chaperones and folding catalysts [BR:
csav03110
]
115706958
03029 Mitochondrial biogenesis [BR:
csav03029
]
115706958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115706958
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115706958
Messenger RNA biogenesis [BR:
csav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115706958
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP60 / Chaperonin
115706958
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115706958
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115706958
Exosomal proteins of other body fluids (saliva and urine)
115706958
Exosomal proteins of breast cancer cells
115706958
Exosomal proteins of colorectal cancer cells
115706958
Exosomal proteins of bladder cancer cells
115706958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
115706958
NCBI-ProteinID:
XP_030490603
LinkDB
All DBs
Position
1:41577060..41582196
Genome browser
AA seq
573 aa
AA seq
DB search
MYRIASKLASSINSSNYKKLLYSRVTCNRNYVAKDINFGVGARAAMLGGVSEVAEAVKVT
MGPKGRHVIIEKSHGAPKITKDGVTVAKSINFKDKYKNVGADLVKQVARATNNVAGDGTT
CATVLTQAILTEGCKSIAAGTNVMDLRSGINMAVNAVIADLKSRALMISTPEEITQVATI
SANGEREIGELIAKAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFVTDQKT
QKCELDNPYILIHEKKISDMNLLVRILEHTVKKNRPLLVVAEDIESDALSMLILNKHHAG
LKVCAIKAPGFGDNRKANLDDLAILTGGEVISEDRGLTLDKVQLEMLGTAKKVTVSLDDT
IILHGGGHKKLIEERCEELRAAMEKSTALFDKEKSQERLAKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYASKALENLQTQNEDQKRGVQIIQSALKAP
TFTIVQNAGFDGALILGKLLEQNDPNLGYDAAKGDYVDMVKAGIIDPLKVVRTALSDAAS
VSLLLTTTEAAVVENTDQKKPPSRMPDMGDMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatagcttcaaaattggcctcatccataaattcatctaactataagaagctg
ctatatagcagggttacttgcaacagaaattatgtggccaaagatatcaattttggggtt
ggggctcgtgcagcaatgctgggaggtgtctctgaggtcgctgaggccgtgaaagttaca
atggggcctaagggtcgtcatgtgattattgagaaaagtcatggggcacctaagattaca
aaggatggtgtaaccgttgccaaaagcatcaattttaaggataagtataagaatgtaggc
gctgatcttgtaaaacaggttgccagagctaccaataatgttgcaggcgatggtaccact
tgtgctactgttcttacccaagcaatactgacagaaggttgcaagtcgatagctgcaggg
acaaatgtgatggatttgcgcagtggtatcaatatggctgttaatgctgttattgcagat
ctgaaaagcagggcactgatgataagtacaccagaagaaattactcaggttgccactatt
tctgcaaatggtgaacgtgagattggagaattgatagccaaagcaatggaaaaagttgga
aaggaaggagtcatcactgtcgctgatggtaataccttagacaatgagttagaagtggtg
gaaggaatgaagcttgccagaggttatatttctccttactttgtcactgatcagaagact
cagaaatgtgaacttgataatccatatatcctcattcacgagaagaaaatttcagacatg
aatttgctcgtgagaattctggagcatacagtaaagaaaaacagaccacttcttgttgtg
gccgaggacattgaaagcgatgcactgtctatgcttatactcaacaagcatcatgctggg
cttaaggtttgtgctatcaaagctcctggttttggggataacagaaaagcgaatttagac
gatcttgccatcctcactggcggagaggttatcagtgaagatcgtggtctaactcttgat
aaagtccaacttgaaatgcttggtactgcaaagaaggtgactgtttctcttgatgacaca
atcattctacatggaggtgggcataagaagctgatagaagaaagatgtgaggagttaaga
gctgcgatggagaagagtactgccttgtttgacaaggagaaatcgcaggaacgtcttgca
aagctatctgggggtgtagcagtttttaaggttggaggggcaagtgaggcagaggttggg
gaaaggaaagacagggtaacagatgccttaaatgctacaagggcagctgtggaagagggt
atcgtcccaggtggtggtgttgctcttttatacgcatccaaagctttagaaaacctccag
actcaaaatgaagaccagaaaagaggcgtacaaataatccagagtgctctcaaggcaccc
acattcacaatagtccaaaacgcaggttttgacggtgcgttgattcttggcaaactgttg
gaacaaaatgatccaaatcttggttatgatgctgcgaaaggtgactatgtcgacatggta
aaggctggcataattgatcctctcaaagttgtgcgaacagcattgtcagatgctgccagc
gtctcattgcttttgacaacaactgaggcagctgtagtggaaaatacagaccagaagaaa
cctccaagccgtatgccggacatgggtgatatggactactaa
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