Cannabis sativa (hemp): 115707030
Help
Entry
115707030 CDS
T08987
Name
(RefSeq) myosin-17 isoform X1
KO
K10357
myosin V
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115707030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115707030
04131 Membrane trafficking [BR:
csav04131
]
115707030
03029 Mitochondrial biogenesis [BR:
csav03029
]
115707030
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csav04812
]
115707030
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115707030
mRNA cycle factors
P-body specific factors
115707030
Membrane trafficking [BR:
csav04131
]
Others
Actin-binding proteins
Myosins
115707030
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115707030
Cytoskeleton proteins [BR:
csav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115707030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
Zeta_toxin
TSC22
Motif
Other DBs
NCBI-GeneID:
115707030
NCBI-ProteinID:
XP_030490697
LinkDB
All DBs
Position
1:41983270..41995624
Genome browser
AA seq
1598 aa
AA seq
DB search
MAAPVNIVLGSHVWVEDPTLAWIDGEVTRINGLEVHVHTTNGKTVITDSMNVFPKDTEVP
PGGIDDMTKLSYLHEPGVLENLAIRYELNEIYTYTGNILIAVNPFQRLDHLYDTHMMAQY
KGAPFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGHS
GVEGCTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNKYGRISGAAIKTYLLE
RSRVCQISDPERNYHCFYLLCAAPKEDIEKYKLGSPKSFHYLNQSKCYELDGVSDGDEYL
ATRRAMSIIGISEEEQESIFRVVAAILHLGNINFSKGEEIDSSVIKDDESRYHLNVTSEL
LRCDAQSLEEALIKRVMVTPEEVITKTLDPDNAINSRDALAKTLYSRLFDWLVDKINNSI
GQDPNSNSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYNKEEID
WSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNEKRFIKPKL
SQTDFTISHYAGEVTYQANQFLDKNKDYVIAEHQALLTASNCSFVGGLFPPLPEDSSKSS
KFSSIGSRFKLQLQSLMEILSTTVPHYIRCVKPNSVLKPAIFENLNIIQQLRCGGVLEAI
RISCAGYPTRRTFYDFVNRFGLLVPEVLEANYDDKVASQMILDKKGLKGYQIGKSKVFLR
AGQMAELDARRTEVLGNAARTIQRQIRTFIAHREFVTLRKAAIQLQSRWRGKIACKLYQH
LRQEAAALKIQKNFKQYRITKSYRIQRSSAIKLQAGIKAMLARKEFRFRKQTKAAVNIQA
HWHCYRAHSYYRSLQKAVVVTQCEWRCRVARKELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEESKAQEIAKLKDILRAKDLQVEEANALVIKEREAAKKAIEEAPP
VIKEIPVLVQDMEKVESLTTEVEKLKMLLASEAQKYEKVIEGYAAEQIAYEKLATKLELA
KMKEDEFEDSLQRLQETVSNLESENQVLRKQAPSISPTGQTSSARKSKIILTTIQNGHAG
KVEMRENPMMVENGHAYNVEMRENPTTVENGHADNVEKRENPMVENGHAGNGEMRRNPTV
ENGHADNEEMRESRYLITCNGQQSETEESPQKSANKKQQANHDLLIKCISQDLGFSGGRP
VAACLIYKCLLQWKSFEVERASIFDSIIKNIGTLVEKARGNSDVLSYWLSNTSTLLLLLQ
RTLRATGVAGLTPQRRRMPTSLIGRMSQGLRASPQSAGFSFFSNRVLGGVEEVRHVEPRY
PTLLFKQQLIAVLENIYGKLRDNLKNDITPFIGLCIQAPRYGTTRAGVLQGHSQANSEAQ
QAVNAHWQSIVNTLNNYLMIMKANFVPPLLIRELFAQIFSFINVQLFNSLLLRRECCSFS
HGEYVKAGLSELEQWCHGATEEFTGFASDELKQLRQAVGFLVIHQKPNKSLTDISNDLCP
ALSIQQLYRISTMYWDDKYGTHSVSSSVISRMRAMMNDDNGNPRRHSFLLDDNSRIPFTV
EDISKSMGAGEIEVADFEPPPLLRYNSEFAFLLQRSGD
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccagttaacatagtgttaggctctcatgtatgggttgaagatcctactttg
gcttggattgatggagaagttacgcggatcaatggcttggaggttcacgttcataccaca
aatggaaaaacagtaatcacagatagcatgaatgtttttccaaaggataccgaagttcca
cctggagggatagatgatatgacaaaactatcatatttgcatgaacctggagttctggaa
aacctggccattagatatgaacttaatgaaatctatacatacactggaaatattctgata
gcagtcaatccatttcaacgattggatcatctttatgatactcacatgatggcacaatat
aaaggagctccttttggagaactaagccctcatgttttcgcggttggagatgctgcatac
agggcaatgattaatgagggaaaaagtaattccattttggtaagtggagagagtggtgct
ggtaaaactgagacaacaaagatgctcatgagatatcttgcctatttgggtggccactcg
ggagtggaaggatgtactgttgaacaacaagttttggagtccaacccagtgcttgaagca
tttggcaatgccaaaacagttagaaataacaactcaagtcgttttggaaaatttgttgaa
attcaatttaataagtatgggaggatatctggtgctgctatcaaaacctatctgcttgaa
aggtctcgggtttgccaaatttctgatccagagagaaactaccattgtttctaccttctt
tgtgctgcaccaaaagaggatattgagaaatataaattgggtagccccaagtctttccat
tatttaaatcagtccaaatgttatgagctggatggggtgagtgatggtgatgaatatctt
gctactagaagggcgatgagcattatcggaatcagtgaagaggagcaggagtcaatattt
agagttgtagctgcaatacttcaccttggtaatatcaatttttccaaaggggaggaaata
gattcctcagtcatcaaagatgatgaatcgagatatcatcttaatgtgacctcagaactt
cttcgatgtgatgcccagagcttggaagaggctctcattaaacgagtaatggtgactcca
gaagaagttatcacaaaaactctcgaccctgataatgcgattaatagcagggatgcacta
gctaagacattatattctcgcttattcgattggctggtggacaaaatcaacaattcaatt
gggcaggatccaaactcaaattcaataattggagtccttgatatttatggctttgaaagt
tttaagtgcaatagttttgagcagttttgtatcaactttacaaatgaaaaactacaacaa
cattttaatcagcatgtgtttaaaatggaacaagaggaatacaacaaagaagaaatagac
tggagctatattgagtttatcgataaccaagatgtgctggatctaattgaaaagaaacct
ggaggaattatagcactcttagatgaagcctgcatgtttccaaagtccactcatgaaact
tttgcacagaagttgtatcagactttcaaaaatgagaaacgatttataaagccaaagctt
tctcagactgattttactatatcacactatgcgggcgaggtaacttatcaagccaatcag
tttctagacaagaacaaagattatgtcattgctgagcatcaagctttgctaacagcctca
aattgctcatttgtgggtggtctgtttcccccacttccagaagattcgtcaaagtcatcc
aaattttcttccattggatcgcgctttaagctacaacttcagtctttgatggaaatcttg
agtacaacagtacctcattacattagatgtgtgaagccaaacagtgtcctgaaacctgct
atatttgagaatcttaatattattcaacaattgcgatgtggtggtgtccttgaggcaatc
aggattagttgtgctggctatcctactagacgcacattttatgattttgtaaatcgtttt
ggtcttttggttcctgaagttttagaagcaaattatgatgacaaggttgcaagccaaatg
attcttgataaaaagggattgaaaggataccagataggcaagtcaaaggtcttcctcaga
gcaggtcagatggctgagctggatgctaggaggacagaagtacttggaaatgctgctaga
acaattcaacgacaaattcgtaccttcattgctcatagagaatttgttacattgcgcaaa
gctgcaattcagttgcaatcccgttggcgaggtaaaatcgcatgcaaactgtatcagcac
ttgagacaagaagctgcagcattgaagatccagaagaatttcaagcaatatagaatcaca
aaatcctacagaatacaacggtcctccgcaataaaattgcaggcaggcataaaagcaatg
cttgcacgtaaggagttcagattccgaaagcaaacaaaggctgctgtcaacattcaggct
cattggcattgctaccgagctcattcttactatagaagtctacaaaaggctgtggttgtg
actcagtgtgaatggagatgcagagttgcaagaaaagagctcagaaagctcaaaatggct
gccagagaaacaggggctcttaaagaagcgaaggacaaattggaaaagcgtgttgaggag
cttacttggcggttacaattggagaaacggttgaggactgatctcgaggagtcaaaagct
caggaaattgcaaaattgaaggatattttgcgtgcaaaagatctacaagtagaagaagca
aacgccttggttattaaagagcgagaggcagctaaaaaagctattgaagaagcacctcct
gtcattaaggagatcccagttttagtacaagatatggaaaaggttgaatccttgaccact
gaagttgagaagttgaagatgttactagcatccgaagcacagaaatatgagaaggtcatt
gagggttatgctgctgaacaaatcgcgtatgagaaattggctacgaagctggaacttgcg
aagatgaaagaagatgagtttgaagattcattgcagaggcttcaagagacggtatctaat
ttagaatcagagaaccaggtactccggaaacaggccccatctatctcacccactggtcaa
acttcatctgcaagaaagtcaaaaattattctgacgacgatacaaaatgggcatgctggc
aaagtagaaatgagagaaaacccgatgatggtagagaatgggcatgcttacaatgtagaa
atgagagaaaacccgacgacggtagagaatgggcatgctgacaatgtagaaaagagagaa
aacccgatggtggagaatggtcatgctggtaatggagaaatgagaagaaacccgaccgta
gagaatgggcatgctgataatgaagaaatgagagaaagtagatatcttataacatgtaat
ggtcagcagtctgaaactgaagaaagccctcagaaatctgcaaataagaagcagcaggcg
aatcatgacctgctcattaagtgtatatcccaagatctaggtttctctgggggtaggcct
gttgctgcttgtctgatatacaaatgccttctgcagtggaagtcatttgaggttgaaaga
gccagtatttttgacagtatcattaaaaatataggcacattagttgagaaggcccgtggt
aacagtgatgtgctatcttactggctgtctaatacatccacattgcttttactcctccaa
cgcacactacgagctactggagttgccggcttaactccacaacgtcgaaggatgccaact
tctctgattgggaggatgtctcaaggccttcgtgcatctccacagagtgctggtttctcc
ttcttcagtaatcgggtacttggtggagtggaagaagttcggcatgtcgaacccagatat
ccaactttgcttttcaagcagcaacttatagctgttcttgagaatatatatggaaaactg
agagacaatttgaaaaacgacatcaccccgtttattgggttgtgcatccaggcaccgagg
tatggaacaactcgggctggtgtgttgcaggggcattcacaagctaattctgaagcgcaa
caagctgtaaatgctcactggcagagcattgtgaataccttaaataactacttgatgatc
atgaaagccaattttgtacctccattgctgatccgcgaattgttcgctcagatattttca
tttatcaatgttcagttgtttaacagccttctcttgcgacgtgaatgttgctcatttagt
catggggagtatgtcaaagcagggttgagtgagttggaacagtggtgtcatggtgcaacc
gaggagttcacagggtttgcttcagatgaactgaaacaactcagacaggcagttggtttc
ctggtcatacatcagaagcccaataaatcattgacagatatctcaaatgatctttgtcct
gctctcagcattcagcagttgtatagaatcagcacaatgtactgggacgacaaatacggt
acacatagcgtgtcttctagcgtaatctcacgtatgagagctatgatgaatgacgacaat
ggcaacccgcgcaggcattctttcttattggacgataactcgagaattccttttactgtg
gaagacatttccaagtccatgggcgcgggtgaaattgaagtagctgattttgagcctcca
cctttgcttcgatataactcagaattcgcttttctgctacaacgttcgggtgattga
DBGET
integrated database retrieval system
