Cannabis sativa (hemp): 115707221
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Entry
115707221 CDS
T08987
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115707221
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115707221
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
115707221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
RING_XB3-XBAT31
Prok-RING_1
Neuropeptide_S
Prok-RING_4
zf-RING_4
Cadherin_C_2
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
115707221
NCBI-ProteinID:
XP_030490965
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All DBs
Position
1:complement(66164090..66165865)
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AA seq
435 aa
AA seq
DB search
MNHQRISIVIIFQLILFNFDHVKAQGLGPDFAGPDDTDFQPSLAVVIGILSVMFVLTFFL
LAYAKFCHRRESAVLLVNRNPNQIGTSNRFSGIDKTVIESLPFFRFSSLKGSKEGLECSV
CLSKFEDIEVLRLLPKCKHAFHISCIDYWLEKHSSCPLCRQKVSSEDLELITYSSSMRFL
WNNNNYNNSTNQSNHHHLGGEEEPTMELFVEREESQRGSSRFSIGSSFRKIEKDHHDEDD
KEKQLLILQTHHDQNQQQQQQVLHKHNHKIVVSDFVYKNRWSNVSSSDLIFLNSEMLNDI
SSTRFHHASNSNSITITTEENDEITKIKEEMGMKRSFQNKVGTSINNINNNNNVSSSSVM
SCGEQRSVSEITAHSRYGILGSNSRLRRDSSLTDQNNVKEERIRRAWLSIAKRTVQWFAN
REERPQNQNLHPSNV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcaaagaattagtatagtgatcatttttcagctcattttgtttaactttgat
catgtcaaagcacaaggtctggggcctgattttgctggcccagatgacacagatttccaa
ccaagtctagctgttgttataggaattctaagtgtcatgtttgtgctaacatttttcctc
cttgcatatgcaaaattctgtcacagaagagagtctgctgttcttcttgtaaaccgaaat
ccgaaccaaataggcacaagcaacaggttttctggtatagacaagactgtgattgagtca
cttcctttcttcagattctcctctctaaagggttcaaaagaaggcctcgaatgctcggtt
tgtctatcgaaattcgaagatatagaagttcttaggcttttgcctaagtgtaaacatgct
tttcatattagttgtattgattattggcttgagaagcattctagttgccctctttgcagg
cagaaagttagctctgaagatcttgaactcatcacttactcttcaagtatgagattttta
tggaacaacaacaattataataacagtactaaccaatcaaatcatcatcatctaggtggt
gaagaagagccaaccatggagctctttgttgagagagaagaaagccaaagagggtcttca
agattcagcattggaagcagttttagaaagattgaaaaggatcatcatgatgaggatgat
aaggaaaagcaattattgatcctccaaactcatcatgatcagaatcaacaacaacaacaa
caagtgttacacaagcacaaccacaagattgtcgtttctgatttcgtttacaagaacagg
tggagcaatgttagttcctctgaccttatatttctcaactctgaaatgctaaacgacatc
tcaagcaccagattccaccacgcctcaaactcaaactcaataacaataacaacagaggaa
aacgacgagattacaaagattaaagaagagatggggatgaaaaggtcgtttcagaacaaa
gttggaacaagtatcaataacatcaataataataataatgttagctcaagttctgtgatg
agttgtggagaacaaagatcagtctcagaaatcactgcacattcaagatatggaattttg
gggtcaaacagtagactcagaagagattcttctttgactgatcagaacaatgttaaagag
gaaagaatcagaagggcttggctcagtattgctaaaaggacagtccaatggtttgcaaac
agagaagagaggccacaaaaccaaaatctacatccctcaaatgtatag
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