Cannabis sativa (hemp): 115707265
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Entry
115707265 CDS
T08987
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115707265
03400 DNA repair and recombination proteins [BR:
csav03400
]
115707265
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
115707265
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
115707265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
Cnd1
DUF2545
Motif
Other DBs
NCBI-GeneID:
115707265
NCBI-ProteinID:
XP_030491035
LinkDB
All DBs
Position
1:complement(43668275..43681613)
Genome browser
AA seq
1788 aa
AA seq
DB search
MALKLEQQLKELGSKLETLPPTKDALVKLLKQAATCLSELDQSPSASILESMQPFINEVV
KPELLKHQDRDVKLLVATSICEITRITAPEAPYSDDVLKDIFQLIVGTFGGLRDTSGPSF
GRRVVILETLAKYRSCVVMLDLECDDLVNEMFSTFLAVASDDHPDSVISSMETIMVVLLE
ESEDVRDDLLFIILSVLGRGKNDVSMAARKLAMNVIEKCAVKLEAGIKQFLISSMSGDSK
SVKCQIDHHEVIYDVYRCAPQILTGVAPYLTGELLTDQLDTRLKAVGLVGDLFALPGSVI
SEAFQPIFSEFLKRLTDRNVTVRMSVVEHVKSCLLSNTSRTEAPEIISALCDRLLDFDEN
VRKQVVAVICDVACYALSSTLLETVKLVAERLRDKSLLVKKYTLERLAEIYRVCCMISTE
SADASIKSDEFDWIPGKILRCFYDKDFRSDTIESVICESLFPTKFSIKDKVRHWARVFSG
FDKVEVKALEKIMEQKQRLQQEMQRYLSLRQMYQDGDGPEIQKKVLFCFRVMSRSFADPA
KAEENFQILDQLKDAKIWKILTSLVDPNTSFHQACTYREELLRILGEQHRLYDFLSTLSV
KISYLLFNKEHVKELLLEVAAQKLAGNSLYTSSCMNILVILARFSPMLLSGAEEELISFL
KDGDEIITEGVLHILAKAGGIIREQLAVSTSSIDLLLERLCLEGSRRQAKYAVHALAAIT
KDDGLKSLSVLYKRLVGMLEEKTHLPSVLQSLGCIAQTAMPVFETRESEIEEFIINKILK
CNNKTEGGTSWDERSELCLLKIYGIKTLVKSYLPVKDANVRPGIDGLLEILRNILLFGEM
SKDIGSSSVDKAHFRLAAAKAILRLSKFWDHKIPLDVFHLTLRISEINFPEAKSLFLSKV
HQYIKDRILDGKYACALLFNIFGSTPSEFQEEKQNLADIIQMYHQTKARQLSIQSDANSL
TAYPEYILAYLVHVLAHHSCPNIDECKDVKAYELLYRQLYLIISMLVHRDEDVKSEASND
MLKETILATISIFQSIKRSEDIVDTAKSKNSHAICDLGLSITKRLAPKEYDTQDSTTSVP
LPPMMYKPYEKKEGDDSVAREEQTWLADESSLKHFESLKLETSETLVSETAEDENLKEGE
GDGNEVPLGKIIKHLRSKGAKAKKSKKAKSTLPESGIAENQVDVLKMVREINLDNLGKSN
KFESSNGHERSPSKISTPDIQHKQNEKRKASDETPVPVPKRRRSASGQSAFRSPSSTLKV
SSTDTRDDSLKRTLARSNKSDISTPRFQKNVSSSKLKGRGLGWSNDETNEVGETSDREME
TDRIGTNNDAQFSSGTVKKRKRKSVSVLAKCKTKEGGKDIEDLIGCRIKVWWPLDKEFYE
GTVKSFDTTKKKHVILYDDGDVEVLRLERERWELVDNGRKPTKKSNSSKASPSKDISPGK
TKNIDALRPKKRTTKIAKGKRTPKKALKHGKKGASKGNHLETEDKESSDVSNLEPSRTSE
VEDEMNSGGSEGEHDEKMDENMSEERESDIEVKPVPKRKQLKGKKRSPIVKESDEEKPDT
GEKVAEDMDMSQNSDEEKQHSEEDHEHDSSDASGEQAKEEEKTDSEDNQVVQAEEDEKTD
SEDNQVEQTKDEEKTDSEDNQVEQAKEEEKTDSEDNQEEQSKEEDKSDSEDNQEGHSKEE
EKTESEDNQEEQAKEENTDSEDNQAEKTKEMERSDSEDERTDSDDNQQEREEEKSDSEDN
QETNSLPKSKIPDKGPQSSVADDDELSDDEPLSNWKNRVAKKVSNRVR
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaagctcgagcagcaactcaaggagttgggatccaaactcgagacccttccg
cctaccaaagacgctcttgtcaagctcttaaagcaagctgcaacatgcctgtctgagttg
gatcaatcaccatctgcatccatcttagagtcgatgcagcctttcatcaatgaagttgtt
aaacctgagctgcttaagcatcaagatagggatgtgaaacttttagttgctacaagcata
tgtgagataacacgaattacagcacctgaagctccttacagcgatgatgttctaaaggat
atctttcaattgattgttggtacttttggtggattacgtgacacaagtggtccatcattt
ggtagaagggttgtcattttggagactcttgcaaaatatagatcatgcgttgtaatgttg
gatcttgaatgcgatgatctggtgaatgaaatgttcagtacatttttggctgttgccagt
gatgatcatccagacagtgttatttcatcaatggagacaattatggttgttctattagag
gagagtgaggatgttcgagacgatcttttgtttattatattatctgtgttgggccgtggt
aaaaatgatgttagtatggctgcaaggaagcttgctatgaatgttatagaaaaatgtgct
gtaaaacttgaagctggaatcaagcagttccttatatcatcaatgtcgggagatagtaaa
tcagtgaagtgtcagattgatcaccatgaagttatttatgatgtttaccgttgtgcacca
cagatcttaactggagttgccccatacttaactggagaactattgactgaccagctagat
actcgcctaaaggcggttggcttagttggagacctatttgcactacctggctctgttatc
tctgaagcttttcagccaatcttttcagaatttttgaagaggttgacagacagaaatgtt
acagtgagaatgtctgtcgttgaacatgtgaagagttgtctactgtcaaatacttccagg
actgaagcacctgaaataatttctgccctctgtgaccgactcttagactttgatgaaaat
gtaaggaagcaagttgttgccgttatttgtgacgtagcctgctatgctttaagttccact
ctacttgaaacagtgaaacttgttgctgaacgtcttcgagacaaatctttgcttgttaaa
aagtataccttggagaggctggccgagatttacagggtctgttgcatgattagtactgaa
tctgcagatgcttcaattaagtctgatgagtttgattggatacctggaaagattttaaga
tgtttctatgacaaagatttcagatctgatacaattgagtctgttatttgcgaatcgctg
ttcccaactaagttttcgatcaaagataaagttcggcattgggcaagagtcttttcagga
tttgataaagttgaggtgaaggctcttgagaagataatggagcagaagcaaaggttacag
caagagatgcagaggtatctgtctctcaggcagatgtatcaggatggtgatggtcctgag
atccaaaaaaaagttctgttttgcttccgtgtaatgtcacgttcgtttgctgatcctgcc
aaggctgaagagaattttcaaattcttgatcagttgaaagatgctaaaatctggaagatt
cttactagtcttgttgatccgaatactagctttcatcaagcttgtacttatcgggaagaa
ttacttaggattcttggcgagcagcatcggttatatgatttccttagcactctttctgtg
aagatttcttatctacttttcaacaaggaacatgtgaaggaacttcttctggaggttgct
gctcaaaaattggcagggaattcattatatacatcatcgtgtatgaatatactggtgatt
cttgcacgcttcagcccaatgctactgagtggggcagaagaagaattaataagctttctt
aaagatggtgatgaaattataacagaaggtgttttgcatatcttggcaaaggctggtggt
attatccgcgaacaactagccgtatcgacaagttccatagatcttttgttagagaggcta
tgtttagaagggagtcgaaggcaggcaaagtatgctgtacatgcccttgcagcgattaca
aaggatgatggacttaagtcactttctgttctttacaagaggcttgtgggcatgctggag
gagaagactcatttgccttctgtgctgcaatccctgggttgcatagctcagactgcgatg
cctgtttttgagaccagagagagtgaaattgaagaatttataataaataagattttaaaa
tgcaataacaagacagaaggtggaacatcttgggatgaaagaagcgagctatgtttgtta
aagatatatggtattaaaacactggtcaaaagctacttgcctgttaaagatgcaaatgtt
cggcctggcattgatggtctcctcgaaattttgaggaatatacttttatttggagaaatg
tcaaaagatataggatcaagttcagtggacaaggcccattttcgacttgccgctgcaaag
gcaatccttcgtctgtcaaagttctgggatcataaaatccctcttgatgtgttccactta
accttgaggatatctgagattaatttccccgaagctaagagcctgtttttaagtaaagtt
catcagtacataaaggatcggattttggatggaaaatatgcttgtgcgttgttgtttaat
atttttggatccacaccatcagagttccaggaggagaagcagaacctggcagacattatc
caaatgtatcaccaaacgaaggcacgacaactctctatccagagtgatgcaaattccttg
actgcttatcccgaatacattctcgcatacttggttcatgtgcttgctcatcattcatgt
ccaaatattgacgaatgcaaggatgtcaaagcttatgaattattatacaggcagttgtac
ttgattatttctatgctggtgcatagagatgaagatgttaaatctgaagcgagtaacgac
atgttgaaagaaaccattcttgcaacaatctctatatttcaaagtatcaaacgatctgaa
gatatagtcgatacagcaaagtcaaagaattcacatgcaatttgtgacctgggattgtca
attaccaagcgcttagccccaaaggaatatgatacccaagactcgaccacatctgtcccc
ctgcctccaatgatgtataaaccatacgaaaagaaagaaggggatgattccgtggccaga
gaagagcaaacgtggctggctgatgaaagttccttgaaacactttgaatcgcttaagctg
gaaaccagtgaaacacttgtttcagaaactgctgaagatgagaatcttaaagaaggtgaa
ggagatggaaatgaagtacctttggggaaaataatcaaacacttacgatctaagggtgcc
aaggccaaaaaatctaaaaaggccaagtctacgttgcctgaatcagggattgctgaaaat
caagttgatgtcttaaaaatggtgagggaaataaacttggataacttgggaaaatctaat
aaatttgaatcaagcaatggtcacgaacgttctcccagcaagatatcgacccctgatata
caacataaacagaatgaaaaaagaaaagctagtgatgagacaccagttccagttccaaaa
cgaagaagatcagcatctgggcaaagtgccttcaggtcaccaagcagcactttaaaggtc
tcatctacagataccagggatgattcacttaaaagaacattggctagaagcaacaagtca
gatatatcaacaccacgctttcaaaagaatgtttcttcatcaaaacttaaaggaagaggt
ttgggctggagtaatgatgagacaaatgaggttggggaaactagcgaccgtgagatggaa
actgacaggattggcacaaataatgatgcccagttttcttcagggactgtcaagaagcgg
aaacgaaaaagcgtttcagttttggcaaagtgcaagactaaggaaggtggaaaggatatt
gaagacttgattggctgcagaataaaagtgtggtggcctttggataaggaattttatgaa
ggcactgtgaagtcatttgatactacgaaaaagaagcatgtgatattatatgatgatgga
gatgtagaagtacttcgtctggagagagagcgctgggaacttgttgacaatggccgcaag
cctacaaagaaatcaaattcatcaaaagcctccccttcaaaagacatatcgcctgggaag
actaaaaatattgatgctttacgtccgaagaagagaacaaccaagatagctaagggaaaa
agaacaccaaaaaaagctttgaagcatggaaaaaagggtgcgtcaaaaggtaatcatttg
gaaactgaagacaaagagagttcagatgtgtcaaatcttgaaccgagcaggacatctgaa
gttgaggatgaaatgaactcaggtggttctgaaggggagcatgatgaaaagatggatgaa
aacatgtctgaggagagagaatctgatattgaagtgaagccagtgcccaaaagaaaacag
ttaaaaggtaagaagaggagcccaattgttaaggagtctgatgaagagaaacctgatacg
ggagaaaaggttgctgaagatatggacatgagccagaatagtgatgaagagaagcaacat
tcagaagaggaccatgaacatgactcaagtgatgcctcaggggagcaggctaaagaggaa
gagaaaacagattctgaagataatcaagtagtgcaagctgaagaggacgagaaaacagat
tctgaagataatcaagtagagcagactaaagatgaagagaaaacagattctgaagataat
caagtagagcaggctaaagaggaagaaaaaacagattctgaagataatcaagaagagcag
tctaaagaggaagacaaatcggattcggaagataatcaagaagggcattccaaagaggaa
gaaaaaacagaatcagaagataatcaagaagaacaggctaaagaagagaatacagattcc
gaagataatcaagcagagaagactaaagagatggagagatcagattctgaagatgagaga
acagattccgatgataatcagcaagagagggaagaagagaaatcagattctgaagataat
caagagacaaatagtctcccaaagtcaaaaatacccgataaagggcctcaaagttctgtt
gctgatgacgatgaactttcagacgatgagcctctgagcaactggaagaatcgagtggca
aagaaagtttcaaaccgtgtccgataa
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integrated database retrieval system
