Cannabis sativa (hemp): 115707363
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Entry
115707363 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115707363
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115707363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115707363
Spliceosome [BR:
csav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
115707363
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GFIT
Motif
Pfam:
UCH
zf-UBP
Pox_G5
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
115707363
NCBI-ProteinID:
XP_030491158
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Position
1:44355092..44359396
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AA seq
558 aa
AA seq
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MKSKREREADTVLVSEDGASDSDPKRQKVISRSSLSSSSSPAASENSLLPGFNYGDEDED
EENRPPVNGLTKRNGVPEVEEYDDDDDDYPLDQGGQVKRSRDIEIRRDCPYLDTVNRQVL
DFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVFINLQTEKVYCLP
DGYEISDPSLDDIRHVLNPRFTQEQVEQLDKNKLWSRALDGSDYLPGMVGLNNIKETDFV
NVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRYGELTRKIWHTRNFKGQVSPHEFLQAV
MKASKKRFRIGAQSDPVEFMSWLLNTLHSDLRNSKKNSSIIYDCFQGELEVVKETPNKSI
TEKKEDGEELDGVTQHNGIFTETYRMPFLMLGLDLPPPPLFQDVMEKNIIPQVPLFNILK
KFDGEMITEVVRPRIARMRYRVTRLPQYIILHMRRFTKNNFFVEKNPTLVNFPVKNLELK
DYIPLPTPKENERLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEESWYAMQDLHVEETLP
QMVALSETYMQIYEQQQQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaaagagaacgcgaggctgatactgttttagtcagcgaggatggggcttct
gattctgatccaaaacgacagaaagtgatttcccgttcgtccctttcttcctcaagttct
ccagctgcctctgagaactctcttcttcccggttttaattatggtgatgaggatgaagat
gaagaaaatcgaccgcctgttaacggtcttacaaaacggaatggtgttccagaagtggag
gaatatgatgatgatgatgatgattatccacttgatcaaggaggccaggtaaagagaagc
cgtgacattgagattagaagggattgcccatatctcgatactgttaatcgccaggttttg
gattttgattttgagaagttttgctctgtttctctgtcgaatttgaatgtctacgcctgt
ttggtttgtgggaaatattaccaaggaagggggaggaagtctcatgcttacactcacagt
ctggaagccggacaccatgtttttataaatcttcaaacagaaaaggtgtattgccttcct
gatggatatgagattagtgatccgtcattagatgatattcggcatgttctaaatccaagg
ttcacccaggaacaagttgaacaacttgataaaaataagctgtggtcaagggcacttgac
ggttctgattatcttcctggaatggttgggcttaataatattaaggaaactgattttgtg
aatgttacaattcaatcactgatgagagtaactcctttaagaaactttttcctcattcct
gagaattatcaacactgtaaatcgcctcttgttcaccgatatggtgagctaacacgaaag
atttggcatacaagaaacttcaaaggacaggtgagcccacacgagtttctgcaggcagtt
atgaaagccagtaaaaagcgttttaggataggagctcagtcggatccagttgaatttatg
tcatggcttcttaacacactgcattcagatcttagaaattcaaagaaaaatagcagtatc
atttatgattgctttcagggagaactggaggttgtgaaggagactcctaacaaatctatt
actgaaaagaaagaagatggtgaggagcttgatggtgttactcagcacaatggcattttc
acagaaacttacagaatgccattcttaatgcttggactggatttgccaccacctcctctt
ttccaagatgtgatggagaaaaatattataccacaggtccctctgttcaacattctgaag
aaatttgatggtgagatgatcactgaagtagtccgacctcgcatagcaagaatgaggtat
cgggttaccagattaccacaatatatcattctacacatgcggagatttacaaaaaacaat
ttctttgttgagaagaatcctacattagttaactttcccgtaaagaaccttgaactgaag
gattacatccccttgccaacacctaaggaaaacgagagattacgctcaaaatatgattta
attgccaatattgttcatgatggaaagcctggcgagggttcttacagggtatttgtccag
agaaagtcggaagaatcatggtacgccatgcaggatctgcatgttgaagaaacgcttcct
caaatggttgctctctccgagacttacatgcagatatatgaacaacaacaacagtaa
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