KEGG   Cannabis sativa (hemp): 115707533
Entry
115707533         CDS       T08987                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csav03036]
    115707533
   03400 DNA repair and recombination proteins [BR:csav03400]
    115707533
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115707533
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115707533
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 115707533
NCBI-ProteinID: XP_030491397
LinkDB
Position
1:complement(40640160..40648248)
AA seq 1126 aa
MAEPSDLTQHIESYVDTSRSQSQQAASLDSITSLVKNDFITIETLVREMEMYLTTTDNVI
RARGTLLLGEVLRRLASKPLGSAIIHSLIGFFTDRLVDWRALRGALVGCLALLRRKSDVG
VVSSTDAKAVAEVFLNTLQVQSLGQHDRELCFQLLECVLECYPNEVASMDELLLYGICEA
VDGEKDPHCLLLAFHIICAVIQLFPDPNGQLANFSGELFETLNSYFPIHFTHPKGEDTDV
KRDDLARALMIAFSSTPLLEPYVIPLLLEKLSSSLSSSKVDSLKYLSYCSLKYGADRMTK
HAGAIWSSIKSEISTSVKEPTEAVTSESINGLGFQENEIAAEALVLLGIVVLQNNDLYLS
LILDDEDISSIFNIITSYRRYNDIPLEGKERLHVVGRILYITSKTSIVSCNRVFETFFPR
LVGILEGNSSGDHFLNFGALYLSVELLAACRDLIVDFGELASNSFSAHEACCCIIRNCFD
SLIQILCPTLVATATEAVHDVDIYFRVKSLQILATFPEGHLPISKSIFESILTTLVSVIL
VDFKQMLLWKLAMKALVLIGSFISKSNESEKGLSYTNIVVEKIVSSLSNDKFTLPFPLKL
EVLSELGATGQNHMLMIVEGLEGAIFANLDDYFVLGNKSSAELAIQLMQCYSKKVIPWIR
EVDGLVEVLLRFIVNIWERVESWMSHSIQLQEKGLLNATTMAMKVTVASCSWELQNTIIQ
KAYTVLASNTSLLPKKSPLTFIPVELEGLQLTLHADNVSGKDELLLSLFASVIIAIQPRV
EIPNIKEILHLFLTTLLKGHVSSAQALGSIINKLGTKSYRAEMSNGFMLEEAIDILLKTR
SWNPQDSGALSSGNEMSLAELCLGFVNHRQLQINAIVGLAWVGKGLLLRGHEKVKDVVMI
LLECILPEGNIWASNLTQDLHPSVQKSAADAFHLLMSDSKICLNRKFHTIIRPLYKQRLF
SIVMPILQSSIRKADSSISRSMLFRASAHIISDTPLIAVLSEANKLIPILLEGLSIFSED
TLDKEELYNLLLVLSGILTDKKGQEAVIENATSIINCLTGLMVYPHMMLVRETAIQCLTA
MSELPHARIYPMRPQVLRALLKAADDPKRFVRQEAVRCRQAWASIA
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggcggaaccgagcgacttgactcagcacattgagtcttacgtcgacacctctcgctcc
cagagtcaacaggcagcaagtttggattctatcacttcacttgttaagaatgacttcata
actattgaaactctggtcagagagatggaaatgtacctgaccactacagataatgtcatt
cgagctagaggcactcttcttcttggggaagtacttcgacgtcttgcttcaaagccacta
ggcagtgctatcattcatagcttaattggattcttcacagataggctggtagattggaga
gcattacgcggggctcttgttgggtgcttagcactactgaggagaaaaagtgatgttggt
gtagtctcttccactgatgcaaaagcagttgctgaggttttcttaaataccctacaagtg
cagtctttaggtcagcacgacagggagctttgttttcagcttctggaatgtgtcttagaa
tgctatcccaatgaggttgcttccatggatgaactccttctgtatggaatctgtgaagct
gttgatggagagaaggatcctcattgcttattgctagcctttcacatcatttgtgcagta
attcaactatttccagatcctaatgggcagctagcaaatttttctggagagctttttgaa
actttaaatagttactttcccattcattttactcatccaaaaggagaggacactgatgtg
aaaagagacgatcttgcaagggcgcttatgatagctttctcatcaacaccacttcttgag
ccatatgtcattcccttgcttcttgaaaaactctcttcttccctgtcatcatctaaggtt
gattctttgaagtatctgagctattgctcactgaagtatggagcagacaggatgaccaaa
catgctggagctatttggagttcaattaaaagtgaaattagtacttcagtaaaagagcct
actgaagctgttacatcagaatcaataaatggtcttgggtttcaggaaaatgaaattgca
gccgaagctttagtgctcctaggaatagttgttttgcaaaataatgatttatatttaagt
ttaattctggatgatgaagacataagtagcattttcaacattattacaagttacagaaga
tacaatgatatcccattggaaggcaaagaaaggctacatgttgttggtcgcattctatat
attacctcaaaaacatccattgtttcttgtaatagagtgtttgaaactttttttccccgc
ttggtgggtattctcgaaggaaattcatctggggatcacttcctaaattttggagctcta
tatctctctgtggaactccttgcagcatgtagagatttgattgtagactttggagaactt
gcttctaactctttttcagctcatgaggcatgctgttgcatcattcggaactgttttgat
tcactaattcaaattctctgccccacccttgttgcaactgctactgaagctgttcatgat
gtggatatttactttagagtaaagagcttgcagattttggctacctttcctgaaggtcac
ttaccaatatcaaaaagtatattcgagagtattttgacaacacttgtgtcagttatactc
gtggatttcaaacagatgttgttatggaagcttgctatgaaggcattagttctcatcggc
tctttcatcagtaaatctaatgagtcggagaagggactgagctatacaaatattgttgtt
gaaaaaattgtttcatcattgtctaatgataaatttaccctgccttttccactcaaactg
gaagtgttatctgaacttggtgcaactggacagaatcatatgctgatgattgttgaaggg
ttggaaggggctatatttgccaaccttgatgattattttgtccttgggaataaaagttct
gctgaattagcaattcaacttatgcaatgctattctaaaaaggtcattccgtggatccgg
gaagttgacggtctcgtggaggtcctgttgcgtttcatcgtaaacatttgggaacgtgtt
gagagctggatgtcccatagtattcaactccaggaaaaagggcttcttaatgcaacgact
atggcgatgaaggttactgttgcaagttgttcatgggaactccagaacaccataattcag
aaggcctatactgtacttgcatcgaatacatctcttctaccgaagaaatctcctttgact
ttcattccagtcgaacttgaagggctacaacttactctgcatgcagacaatgtttctgga
aaagatgaattattattatcattatttgcatcagtaattattgcaattcagcctagagtt
gagattccaaatataaaagagatactgcatttgtttctgacgacactcctcaagggacat
gtttcttcagctcaagcattaggttctataatcaataaacttggtacgaagtcatacaga
gctgagatgtcgaatggtttcatgttagaagaagccattgatatacttttgaaaacaaga
tcatggaatccccaagacagtggtgccttgagtagtgggaacgaaatgagtcttgctgaa
ttatgtcttggttttgtgaaccatagacaacttcaaatcaatgccatagttggacttgcg
tgggttgggaaaggtttactgttgcgtggtcatgaaaaagtaaaagatgttgtcatgatt
cttttggagtgcatattgccagaggggaatatttgggcatcaaatttgacgcaggatttg
catccctctgtacagaaaagtgccgcagatgcttttcatcttcttatgagcgattctaag
atttgtttaaatagaaaatttcatacaataataagaccgctctataagcagcgtcttttt
tccatagtgatgcctattctgcagtcatcaataaggaaagccgattcatcaatttcaaga
tctatgctgtttagggcatctgcccacatcatctcagatactcctctaatagctgtcttg
agtgaagccaataagctgataccgatactgctagagggactatctattttcagtgaggat
actctggataaagaagaactgtacaatcttttgctagtcttatctggaatattaactgat
aaaaagggccaagaagccgttattgagaatgctacttctattataaattgtttgactgga
ctgatggtgtaccctcatatgatgcttgtacgagaaacagcaattcaatgtctcactgcc
atgtctgagttgccccatgcaagaatctatccgatgagaccacaggtattgagggcttta
ttgaaggccgctgatgatccaaagagatttgttcgtcaggaagctgtcagatgtcgacaa
gcgtgggcatcaatcgcatag

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