Cannabis sativa (hemp): 115707614
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Entry
115707614 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115707614
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115707614
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115707614
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115707614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
115707614
NCBI-ProteinID:
XP_030491488
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All DBs
Position
1:36074352..36078084
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AA seq
582 aa
AA seq
DB search
MANGNNAFGKTICSICYEDLKPIVEDLQAISICGHVFHELCLQQWFEYCSNTKKCTCPVC
KQSCKGKDAARLYFQSIGDSVVTQSQRPILDSGEDPETLRREVRRLEAKVLGLDSVLERL
GKDNKELTQELCICKEQEKKETTSKNEALKQNALLQQLLNRKTEELGRSTSECLRLQERN
MALAKELAALKLVSDLDLDEDEVQKLASFGNGGNSQDTIDILRRSLVMRNKTYKELMTKC
NVLGRGESRSIKKLEKAKGKIDKLKARIKEMEIAIEIKDNQVLRELKASKKACYEEVIKN
GTNSKSGSLANIDVLEDQSKQTSATTLKLNQLGGVQDDLLYPIKVQNCVATNDIDVHMAC
DNDEDDCSVIGVNFSKFLTPIHGSPNPDTKDQTTEDILAPKSTQVMSSATYDVKKEASAR
AHRNLGGTTSPRTSVENTSKTFAADIDEDVTVLFDDVPQVKPMLNIRKESSTPISHSNSG
DVCFSGGLLGPDGTNRYLGKWCKRSQNNETRQGQSTSNGDLIAVGADGRGGRIKVLRSLN
QSSADWKANSVGSKRCKLGSKTNSQQSRGCLQIEHFFSRANN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccaatggcaacaacgcctttgggaaaaccatttgctcaatctgctacgaagatctg
aagcctattgttgaagatcttcaagctatctccatttgcggtcatgtcttccacgagcta
tgcctgcagcagtggttcgaatactgttcaaacacgaagaaatgcacttgtcctgtgtgc
aagcagagctgcaagggcaaagatgcagctcggctatactttcagtcaattggggattct
gttgtcacacaaagtcagagaccaatcctcgattctggagaagatcccgagacactgcgc
agagaggtgcgaagattggaagccaaggttctagggcttgattcggtcttggaacgactg
gggaaggacaacaaagagctaactcaggagctttgtatttgtaaggaacaagaaaaaaaa
gaaacaacatcaaagaatgaggccttgaaacaaaatgcattactgcagcaactgctaaat
cggaaaactgaggagcttggtagatcgacttcagagtgcttaaggttgcaagaaaggaat
atggctttggccaaagaactagcagcattaaaattggtttctgatctggacctagacgaa
gatgaggtccaaaaacttgcctcctttggtaatggtggtaatagtcaagatacaatagac
atcctacgaaggtctttggtgatgcgtaacaagacttacaaagaattgatgaccaagtgc
aatgttcttggacggggggagtcacgatctattaaaaaactagagaaggctaaaggaaag
atagataaattgaaggcaaggataaaggaaatggagatagctattgaaataaaagataat
caagttctgagggagttgaaagcttcaaagaaagcttgttacgaagaggtcattaaaaat
ggtaccaacagtaaatctggctccttagccaacattgatgtattagaagaccaaagtaaa
caaacttctgcgacaacacttaaattgaaccagttgggaggagtgcaagatgatttattg
tatcctataaaagtacaaaactgtgttgcaactaatgatattgatgtacacatggcttgt
gataatgacgaagatgattgctcagtaataggtgtgaatttttcgaaattccttacgccc
atacatggtagtccaaatcctgatacaaaagatcaaacaactgaggatattcttgcaccg
aagtctactcaggtaatgtctagtgcaacttatgatgtgaaaaaggaagcttcagcgcgt
gcacacagaaacctgggtggtactacgagtccaagaactagtgtagagaatacctccaag
acctttgctgctgacattgatgaggatgtgacggtgctttttgacgatgttcctcaagtc
aagcccatgcttaacattagaaaagaatcttcaaccccaatatcacactcaaattcagga
gatgtatgtttctctggaggattgcttggtcctgatggaacaaacaggtacttgggtaag
tggtgcaagcgtagccagaataatgaaacaagacaaggtcaaagcactagtaatggtgat
ttaattgctgttggtgctgatggaagaggcggtagaatcaaagttctaagatctttgaac
caatcatcagcggattggaaggctaattcagttgggtcaaaaaggtgcaaattaggatcc
aagacaaatagtcaacagtcccgtggatgcttgcaaattgaacatttcttcagtcgagcg
aataattaa
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