Cannabis sativa (hemp): 115707739
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Entry
115707739 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115707739
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115707739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115707739
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115707739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_19
Suf
TPR_11
SPOB_a
Motif
Other DBs
NCBI-GeneID:
115707739
NCBI-ProteinID:
XP_030491638
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Position
1:complement(44924069..44927772)
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AA seq
656 aa
AA seq
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MADVVQYRLERMVNELDDLERRGIFTRREINEIVKQRRKFEYRLKRPSPLKQDYLAYIEY
ETQLDSLRRLRKKSVARQLRNQGIDENKKKMKKSVSDFAGVVRIVDIYRLAVTRYKGDID
LWFRYLEFCREKRHGRMKKVLAQAIRFHPKVPGLWIYAAAWEFDHNLNVAAARALMQSGL
RVCPTSEELWIEYLRMELTYLNKLKARKVALGEDEGTLVRDKKVAGEKQWRDGNEDLFMS
LNEEKENNESNVENKKTRGKVDVFREQGFSILKAIYSGAIEALPSSLNLRKKFFEILDAL
DLAHSEEMHEQILSEMKRDFSTEPEYWDWLARLEFDPEVIEGMSDELVLSQTEKAIQVYE
EALKVMPSAKVFDNYTRFMMDVILLQKGEKEILELSGPYATYISHLLGIYEKAKALGCIT
EDLAYQYVSFYLQLGRLDEARNLADKLCREIFSDSTRLWLLKASLEVRHVTKDSLSSPTK
ADLLSIFGLLKDVLPKISVSKAESLWIMALKLFSSHKEYFEKLVGLSIVSISKDGDSDNG
FSLSSAIVNFVLQNDGIQSAREMYKRFLALPHPGLAIYRNCIDLETNLASVGDKDGLVNA
RKLFESALSTYGQNLSLWQNYHRLETKMGTSETASAVHWRARKILKDSTALFNSDF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggtgcagtaccggctggagcgcatggtcaatgagcttgacgatctcgag
cgtcgcggcatcttcacacgccgtgagattaatgagatagttaagcagcggcgcaaattc
gagtaccgcctaaagcggccgagtccgctgaagcaggattacctggcttacattgaatac
gagactcaactcgactcgctcagacggctcaggaagaagtcagtggcgcgacagctgagg
aaccagggaattgatgagaataagaagaagatgaagaagtcagtttcagacttcgctggc
gttgtgagaattgttgacatttacagactggcggttacgcgttacaagggtgatattgat
ctttggtttcggtaccttgagttttgtcgagaaaaacgtcatggcaggatgaagaaggtc
ctagctcaggctattaggtttcatccaaaggtccctggactttggatttacgcagctgct
tgggaatttgatcacaacttaaatgttgctgctgctcgtgctttaatgcagagcggtttg
agagtttgtcctacatcagaagagctttggatcgagtatcttcggatggaacttacctac
cttaataagttaaaggcccgaaaggttgctcttggagaggatgagggaactctggtccgt
gataagaaagtggccggtgagaaacaatggagagatggcaatgaagacttatttatgtcc
cttaatgaggaaaaggaaaataatgagtcaaatgtggaaaacaagaagacgcgagggaaa
gtagatgtttttcgagagcagggatttagtattttaaaagccatatatagtggagcaatt
gaagctcttccttctagtttaaacctgaggaaaaagtttttcgagatattggacgcatta
gatttggctcattctgaagaaatgcacgaacagatactaagtgagatgaagagagatttt
tcaacagaaccagagtattgggactggcttgcaagacttgaatttgatccggaggtcata
gaggggatgagtgatgaacttgtgctttctcaaacagagaaagctattcaggtatatgag
gaggcccttaaagttatgccttcggccaaagtatttgataattacacaaggtttatgatg
gatgttatacttctccaaaaaggagaaaaagaaattttagaattgtctggtccatatgca
acttatatatcacatctattaggtatatatgagaaagctaaagcattaggatgtattact
gaagatcttgcataccaatatgtttcattttatttacaactgggaagactggatgaagca
agaaacttggcagataagctttgccgtgaaattttttcggactcaacaaggttatggcta
ttaaaggcatctctagaagttaggcatgttacaaaagattcactatcgtccccaactaaa
gctgaccttctatctatctttggacttctgaaggatgttttgccaaaaatttctgtctca
aaagctgagagtttgtggataatggcactcaagctgttttcaagtcacaaagagtatttt
gagaaactggttggcctctctattgtatcaatatctaaagatggagacagtgacaatggt
ttctccttatcatcagctatcgtgaattttgttttacaaaatgatggaattcaaagtgcg
cgagaaatgtataaacgctttcttgcattaccacatccggggctagctatatacagaaat
tgcattgatttggaaaccaacttagcatcagttggtgacaaagatgggcttgtaaatgcg
cggaagttatttgaatctgcactttcaacttatgggcaaaacctgagcttatggcaaaat
taccatcgattagaaacgaagatgggaacatctgaaaccgctagtgccgtccattggcgt
gcaaggaagatactaaaggattcgactgctctctttaattcagatttctaa
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