Cannabis sativa (hemp): 115707853
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Entry
115707853 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115707853
KO
K17925
sorting nexin-13
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csav04990
]
115707853
Domain-containing proteins not elsewhere classified [BR:
csav04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115707853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
115707853
NCBI-ProteinID:
XP_030491797
LinkDB
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Position
1:45676622..45682745
Genome browser
AA seq
1113 aa
AA seq
DB search
MSSQRQQVTIRDLAEEAKKRIVFLAICVVGLSYLMSLTSSSVWINLPAAALLILVGRYLS
LDYETKRKAAAYNSKPPAANTLTQKKPFDRPKVVDGSEWRRRVNSPIVEDAIDQLTRHIV
SEWVTDLWYSKLTPDKEGPEELVHIINGVLGEISGRMRNINLIDLLTRDLVNLICTHLEL
FRATQAKIKKKEGILTIEHRDIELRLIMFADKKLHPALFSAEAEHKVLQHMMSGLISFTF
KPEDLQCSFFRYVTRELLACAVIRPVLNLASPRFINERIESVVVNMNKSKHAVRPVSESS
QPNAEGLTDISSDHFSRFLDSSVTGVELVQLKNDQSRSDTDTRAAENGNGNLSKDPLLSI
DTRSTRSWSSLPMNSQTNDVAGIQRHRSGGEWGDMLDVVSLRKTQALAPEHFENMWTKGR
NYKNKAGDDHLNEHVSQGSSHGKLITENSTKAVSNLKDQVTRGSSSESSHIQSGYTDKFK
ETNSAHFTVQDTPSQSLVNSDGEYLDSGSDTSYTSEDENSSITGLGSPGTKVWDGRNNRN
IAVPHIHHPLENFESHNAKKTAKGRVRYQRHKNQTGRKRSRPSNQNVHVWQEVERTSFLS
GDGQDILKSSKGQANDEDYSDDSDMDSFGRVHSGAAASSSALSSSAAENHNLAVNSLKSS
LAVDSFYKLRCEVLGANIVKSGSRTFAVYSVSVVDVNNNSWSIKRRFRHFEELHRRLKMF
SEYNLHLPPKHFLSTGLDVVVIRERCKLLDDYLKKLMLLPTISGSIEVWDFLSVDSQTYT
FSNSFSIVETLSVGLEDKPSERSKGVSNVGGMDGSSLNTERQEPALRMRNNASGSRLNTP
KAMNYSPVKILGKETTETFDNSGGASETKAQKDVSSLRKSGKVLKGRESDRAASESLDAA
NDLTLPTEWVPPNVSVPILDLVDVILQLQDGGWIRRQAFWVAKQILQLGMGDAFDDWLIE
KIQLLRKGSVVASGIKRLEQILWPDGIFLTKHPKRRAPSPSNTSPGSPSAHQHTEVSSPR
MADDQQEEANRRANLVYELMIEKAPAAIVGLVGRKEYEQCAKDLYFFLQSSVFLKQVGFE
VLELILVSAFPELDNTFKQLHDEKHKFGEFKPQ
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaaggcagcaggtgacgattcgcgacctggccgaggaggccaagaagcgg
attgtgtttctggccatttgcgttgtgggtttatcatacctcatgtcattgacaagttcc
tctgtctggatcaatctgcctgctgctgcattattaattctagtcggccgttatctatca
ctggattatgagacaaagagaaaagctgcagcatataacagcaaaccgcctgctgcaaac
actctcacccaaaagaaaccatttgaccggcctaaagttgttgatgggtctgagtggaga
aggagagtgaattctcctattgtcgaggatgcaatagatcagttaactagacatatagtt
tctgagtgggtgactgatctctggtactcaaagttaacacctgataaagaaggtccagag
gaactagtgcacataatcaatggtgttcttggggagatttcaggacgcatgagaaatata
aatttgattgatcttctaacaagggacctggttaatctcatttgcacacatttggagctc
tttcgtgcgactcaagctaagattaaaaagaaggaagggatattaacaattgaacaccga
gacatagaattaagactcatcatgtttgctgacaagaagttgcatcctgctttattttct
gctgaagctgagcacaaggttttgcagcatatgatgagtggtctcatttctttcacattc
aagcctgaagacctgcaatgctctttctttcgttatgttacccgagagctacttgcgtgt
gcagtaatacgacctgtcttaaacttagccagtccaaggtttattaatgaacgaattgaa
tctgtggttgttaatatgaacaagtccaaacacgcagttaggccggtatctgagtcatct
caacccaatgcagagggacttacagatatctcatctgatcatttttccagattcttggat
tcttctgtaactggagtagaacttgtccaattaaaaaatgaccagtcaagaagcgataca
gatacacgcgcagcagagaatggcaatggaaatctttcaaaagatccattgctttctatt
gatactcgatccacccgttcatggagttcattgcctatgaattcccaaactaatgatgtg
gcaggtattcaacgacatcgctctggaggagaatggggtgatatgttggatgttgtttct
ctcagaaaaactcaagccctggctccagaacattttgaaaacatgtggacaaaaggaaga
aactacaaaaacaaggcaggtgatgatcacttaaatgagcatgtttctcagggctcctca
catggaaaattgattacagagaatagcactaaagcagtgtccaatctcaaagatcaagtg
acaagagggagttcttctgagagcagtcacatacagtctggatatactgataagttcaag
gagacaaactcagcccattttacagttcaggatactccaagtcaatctctagttaattca
gatggggagtatctagactcaggaagtgacacatcgtatacttctgaagatgaaaatagc
agtataacaggccttggctctcctggaactaaagtttgggatggtaggaataatagaaat
attgcagttcctcacattcatcatccacttgaaaattttgagagccataatgcaaagaaa
actgctaagggacgtgttcgctatcaaagacataaaaaccagactggtcggaaaagatct
cgaccgagcaaccagaatgtgcatgtttggcaggaggttgagagaacaagcttcttgtct
ggggatggacaagatatactcaagtcttccaaaggacaagcaaatgatgaggactatagt
gatgattctgatatggatagttttggtagggttcatagtggtgccgctgcttcttcatct
gcactttcttcttctgctgctgaaaatcataatctggctgtcaattctctgaaaagttcg
ctggcagttgattcattttataaattgagatgtgaggtattgggtgcaaatattgtgaag
agtggctcaaggacatttgcggtctactccgtatctgttgttgatgttaataataatagt
tggtcaattaaaagaaggtttcgccattttgaggaactgcatcggcgtctgaaaatgttt
tctgaatataatcttcacctgccaccgaaacattttctgtcaactggtttggatgtagtt
gtcattcgagaacggtgtaaattgcttgatgattatttgaagaagcttatgctgcttcca
acaatttccggatcaattgaagtttgggattttctgagcgttgattctcagacatatact
ttctccaattccttctccatagttgaaactttgtcagttggcctagaagataagccatct
gaaagaagtaaaggggtttcaaacgttggtggaatggacggctcttctttaaatacagaa
cgtcaggaacctgcattacgaatgaggaataatgcatctgggtctagattaaacacacca
aaagctatgaattattcaccggtgaaaattctaggtaaagaaactacagagacatttgat
aattctggtggtgcttctgaaacaaaggctcaaaaagatgtatcctcacttagaaagtcg
ggaaaagttttaaaaggtagagaaagtgatagggcagcatcagagtcgttagatgctgca
aatgacctgacccttcctacagagtgggtgccaccaaatgtaagtgttcccatactggat
ttggtcgacgtcattctccagctccaagatggtggatggatcaggagacaagctttttgg
gtggccaaacaaatcctgcaactaggaatgggagatgcctttgacgattggttaatagag
aaaatccagcttctgcgtaagggatctgtggttgcttcagggatcaagcgacttgagcaa
atactctggcctgatggaatattcttaaccaaacacccaaagagacgtgcaccatcacct
tctaacacatccccgggttcacccagtgctcatcaacatacagaagtatcgtcgcctagg
atggccgatgaccaacaagaagaagcaaatcgacgtgcaaatcttgtatatgagctaatg
attgagaaagcacctgcagctattgtcggtcttgttggtcgcaaggaatacgaacaatgt
gccaaggatctatatttctttcttcagtcatctgttttcttgaagcaagtgggttttgag
gttctggagctcattctagtgtcagcatttccagaactagacaacacattcaagcaattg
catgatgaaaaacataaatttggtgagtttaaaccgcagtag
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