Cannabis sativa (hemp): 115707876
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Entry
115707876 CDS
T08987
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3
KO
K03255
protein TIF31
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csav03012
]
115707876
Translation factors [BR:
csav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115707876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
TPR_1
PAM2
DUF5969
Motif
Other DBs
NCBI-GeneID:
115707876
NCBI-ProteinID:
XP_060974170
LinkDB
All DBs
Position
1:46880055..46896717
Genome browser
AA seq
1663 aa
AA seq
DB search
MAPKSGRGKTSKSKAEYKKKKEEKVVPIVLDITVITPYDNQVVLKGISTDKILDVRRLLA
VNVETCHLTNFSLSHEVKGHKLNDKIEVATLKPCLLRMVQEDYTEEAQAVAHIRRLLDLV
ACTTRFTKPKRSPSSPDSKSRKSLNRPNSNKSSGPPRSPPAEPSVPAISEGFGMAAIHPT
PKLSEFYDFFSFSHLSPPVLNLRRCECMEERRDGDYFQIQIKICNGKQIQVVASVKGFYA
VGKQFLQSHSLVDLLQQLSQAFLNSYESLMKAFVEHNKFGNIPYGFRANTWLVPPSFADS
PSSTFQPLPTEDENWGGNGGGEGRNGEYDHQPWATDFAILAKLPCKTEDERVIRDRKTFL
LHSKFVDVSILKATEAISSLLESDSRQNESSIVYENRVGDLSITVKRDSTEVSSNSQVKV
VDQVSGLSVKEFAQKSLLKGLTADESVVVHDTSSLGIVNVRHCGYSATVKAVGNVNKRRF
EAQEIEVDDQPDGGANALNINSLRALLQKPTAEPLGSSQSDLDNSETSMSLVRTVIKESL
KRSQEEPEISERPIRWELGSCWVQHLQKQENQTDDDSKSSGVEPAVKGLGKQFKLLKKRE
KKPGDTISKEDSDSCTSSMEAGEVVNGEVNSEESLKKLVSEDAYSCLKESGTGLHLKTID
ELMKMAHKYYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLQMRSLGRVVELADKLP
HIQSLCIHEMVTRAFKHVLKAVIAASVYNQSDLSEAIASSLNFLLGNSESQENDQNPSGD
HSLKLQWLEAYLSRKFGWKLKEELPYLRKFSILRGLCHKVGLELVPRDYDMESPNPFRKY
DIVSLVPVCKHVACSSADGRNFLESSKVALDKGKLEDAVNYGTKALTKMIAVCGPNHRAT
ASAYSLLAVVLYHTGDFNQATVYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIE
LALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNQRLLG
ADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGPEDLRTQDAAAWLEYFES
KALEQQEAARTGTPKPDALIASKGHLSVSDLLDFISPDQDSKGSDAQKRQRRAKVLQIGD
KVSEEHQVPIADNDTPNDVVDNSIEKEDDTKVNSVNAPLPPPSPPQELEENDGFIAPSEV
VEETTSDEGWQEASSKSRSGNTATGRKFGRRKPALSKLKLQNEHSKSRENRNGKVINSPS
QKVIPKSTTIPTELSSQKQTRVRASVSKVSSSPTTHSTMASKSLSYKEVALAPPGTVLKP
VFDKEEEITVEKPETKTPSVVPPETPSSETEESKSNSVVEAITKSETEEETVASETHRDN
KTEQEEVEVEDEKSKDKNGSKLSAAAEPFKPAPVTMSHPLSSVPATSVYDVRVSQEMLAE
PVVPPVAARVPCGPRSALYYRTNYSFHMRRDFLKFPNPTLERIGSGPQRIMNPNAPEFVP
RRAWQTDPVGGVPTDSNSSIEITLQEAVKSNGEATKESGKKIISESEKSELARQILLSFI
VKSVQHNMDSPSESGNSGKKKFKQNSDAIENDSAIIKIEYGNEGKNTTNDMVSESSDSSS
DVNMKNGDGEGFIVVTKRRKNKQQFSNGVNGLYNQTTICASVR
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaaatcaggtagaggtaagaccagtaaatcaaaagcagagtataagaagaaa
aaagaagaaaaagttgttcctattgtgcttgacattacagtgataaccccttatgacaat
caagttgttcttaagggtatctctactgacaagatacttgatgtaagaagactattggct
gtgaatgtagaaacttgccatctcacaaacttttcactctctcatgaggttaaaggtcat
aagttgaatgacaaaatagaagttgctacactcaagccatgtttgcttagaatggttcaa
gaggactatacggaagaagcccaagctgtggcccatatccgacgtttattggaccttgtt
gcttgtacgacaaggtttactaagcccaagaggtcaccatcaagcccagattcgaagtca
aggaaaagtctcaacaggcccaacagcaataagagctctggcccaccaagatcgccgccg
gcggagccgtcggttccggcgatttcagaggggtttgggatggcagccatacacccaacg
ccgaagctttccgaattttatgatttcttctctttctctcacctctctcctcccgtactg
aatttgagaagatgtgaatgtatggaagaaaggcgcgatggtgattattttcagattcag
atcaagatatgcaatgggaagcagatacaagtggtggcatcagtcaaaggtttttatgca
gtgggaaagcaattcctacaaagccattctttggttgatcttctccaacaacttagccaa
gcttttctcaattcttatgagtccttgatgaaagcttttgttgaacataacaagtttggt
aatattccttatggatttcgagccaatacatggcttgttcctccatcatttgctgactct
ccatcatccaccttccaacctttaccaacagaagatgaaaattggggtgggaatggaggt
ggagagggaagaaatggtgagtatgatcatcaaccatgggcaactgatttcgcgatattg
gctaaacttccttgcaagactgaggatgagagagtgatcagagatcgcaaaacctttctg
cttcatagtaaatttgtcgatgtctcaatattgaaagctactgaagcaataagcagtttg
ttagaatccgattcgagacagaatgagtcctcaattgtgtatgagaatcgtgtaggggac
ttgtccattactgtgaaacgtgactcaacagaagtgagttcaaattctcaagtgaaagtg
gttgatcaagtatctggtttgtctgtcaaagagtttgctcagaagagtttactcaaggga
ctaacagcagatgagagtgttgtagttcatgatacttcttccttgggcattgtcaatgtc
agacattgtggatacagtgcaacagttaaagctgttggcaatgtgaataaaagaaggttt
gaggctcaagaaattgaagttgatgaccaaccagatggaggagcaaatgctcttaatatc
aacagcctgagagctctgcttcaaaaacccactgctgaacctttgggaagtagccaatct
gatttggataattcagaaacttccatgagtctagtcagaactgtaatcaaagagagcttg
aaaagatcacaggaagagcctgaaatttctgaaaggcctattagatgggaattgggttct
tgttgggttcaacatctacaaaagcaggaaaatcaaacagatgatgattcaaaaagttct
ggggttgaaccagctgttaaaggtcttggaaagcagtttaagttgctgaagaagagagag
aagaaacccggtgacacaattagtaaagaagactctgattcttgcactagcagcatggaa
gctggggaggtagtgaatggggaggttaacagtgaagaatcattgaagaaactagtttct
gaagatgcttactcgtgtctcaaagaatctggaactggtcttcatctaaagacaatagat
gaacttatgaagatggcacataaatattatgatgaagttgctctaccaaagctggtaaca
gatttcgggtcacttgagctttctccagttgatggccgtacactgactgatttcatgcat
ttgaggggacttcagatgagatctttgggtcgtgtggtggaacttgcagacaagcttcct
catatacagtcactttgcattcatgagatggtgactagagcattcaagcatgtacttaaa
gcagttattgcagcttctgtttacaaccaatcagacttgtctgaagcaatagcctcatct
ttaaatttcctgcttggaaattctgagtcacaagaaaatgaccaaaacccaagtggtgat
cattcactcaagttgcaatggttggaagcatatctatcaagaaaatttggttggaaacta
aaggaagaacttccttacttgagaaagttttcaattcttcgaggactttgccataaggtt
gggttggagttggtccccagagattatgacatggaaagcccaaaccccttcagaaaatat
gacattgttagcttggttcctgtgtgcaagcatgtagcatgctcttcagctgatggtcgg
aattttcttgagtcatcgaaagttgctctcgataaaggaaagcttgaggatgctgttaat
tatggaacaaaggctctaacgaagatgatagctgtttgcggtcccaatcatcgtgctact
gctagtgcttacagtctgcttgcagtggttctttaccacactggggatttcaatcaggca
actgtatatcagcaaaaggctttggatattaatgagagggagcttgggttagatcatcca
gatacaatgaaaagctatggggatctttcggttttctattatcgccttcaacatattgaa
ttggctttgaagtatgtgaatcgagctttattcctcctccattttacctgtggactatct
cacccaaacactgcagcaacatacattaatgtggctatgatggaagagggcatgggcaat
gttcatgttgctctgagatacctacatgaagctctcaagtgcaaccaaagactattagga
gcagaccacatacaaactgctgctagttatcatgccatagctattgctctttcattgatg
gaagcatattctctcagtgtccaacatgagcaaactacacttaaaatacttcaagccaaa
cttgggcctgaagatcttcgaactcaggatgcggctgcatggcttgagtatttcgaatca
aaagctttagagcagcaagaggcagctagaactggaaccccaaagccagatgccttaatt
gcaagcaagggtcatcttagtgtatctgatctgctggatttcataagtcctgatcaagat
tctaaaggaagcgacgcacaaaagaggcaaagaagagcaaaggtactacagattggtgat
aaggtcagtgaagaacatcaagtgccaatagctgacaatgacacaccaaatgatgtagtg
gataatagcatagagaaagaggatgatacgaaagttaactcagttaacgcgcctcttcct
cctccttctcctcctcaagagctagaagaaaatgacgggtttatagcgcctagcgaagtt
gtggaagaaacaacttcagatgaagggtggcaagaagcaagttcaaagagccgttcaggg
aacactgctaccggtagaaagtttggacgtagaaaaccagctctttcaaagcttaagtta
cagaatgaacattcaaagtctagagaaaacagaaatgggaaggtgatcaattcgccatct
cagaaagtgatccccaagtctactactattcctactgagctttcttcacagaaacaaaca
agggtaagagcttctgtatctaaagtttcttcctcaccaaccactcatagtaccatggct
tcaaaatctctatcttacaaggaagtagctttggcaccacctggaacggttctaaagcca
gtgtttgataaagaagaagagataacagttgagaaaccagaaaccaaaacaccaagtgtt
gttccaccagagacaccatcatcagagactgaagaaagtaaaagcaactctgtagttgaa
gcaatcacaaagagtgaaacagaagaagaaactgttgctagtgagactcatagagataac
aaaactgaacaagaagaagttgaagttgaagatgaaaaatcaaaagataaaaatggaagc
aaactttctgcagcagctgagccattcaagccagcaccagtaaccatgtctcacccctta
agctcagtacctgccacaagtgtttatgatgtaagagtcagtcaagaaatgcttgcagag
ccagtagttcctcctgtggctgctagagtaccttgcgggccaaggtcggcgttgtattac
agaaccaactattctttccacatgagaagagactttctcaagtttccaaaccccacattg
gaaagaattggatcagggcctcaaagaatcatgaaccccaatgcacctgagtttgtacca
agaagagcatggcaaactgaccctgtaggaggggtcccaaccgattcgaattcatcaatt
gaaattacactgcaagaggctgtgaaatccaatggtgaagctactaaagagagtggtaaa
aagatcatatcagagtctgaaaaatcagagcttgcaaggcaaattctacttagcttcatt
gtcaagtctgttcaacataacatggactctccaagtgagtctggaaacagtgggaagaaa
aagtttaagcaaaactcagatgcaatagaaaacgacagtgccattataaagattgagtat
ggaaatgaagggaagaatacaacaaacgacatggtttcagaatcaagtgattcttcttct
gatgtaaatatgaaaaatggagatggtgaaggatttatagtagtgacaaagagaaggaaa
aacaagcaacagttcagtaatggagtgaatggtttgtacaatcaaacaaccatatgtgct
tctgttcgttga
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integrated database retrieval system
