Cannabis sativa (hemp): 115707903
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Entry
115707903 CDS
T08987
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115707903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115707903
03036 Chromosome and associated proteins [BR:
csav03036
]
115707903
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115707903
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115707903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
115707903
NCBI-ProteinID:
XP_030491857
LinkDB
All DBs
Position
1:47251815..47257083
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AA seq
1056 aa
AA seq
DB search
MASPLPRSPVSGASVELDGRSTVSTSCAMDFAAEISSSQDVLQKRMREIETLLPTLQKPE
YYMEPCFDELVSRELMDPGYSSRVPDFTVGRYGFGSVKYIGETDVRWLNLDDIVTFHRHE
VVVYEDESTKPLVGQGLNKTAEVTLVLKLTSSTIEEDQKESVVGKLRQSAQRQEAQFVSF
DSANGEWKFLVQHFSRFGLSEDDEDDMVMDDAPAVQEPTAMIGEEISDIDEQPQFDNSGN
LLSHSLPTHLGLDPIKMNELRMLMFRDEEEDSDDFDQFLSHQKSSFNKESVKPPLQNLTP
MNHRATPLVARKTPLALLEYKHGSFDSNSPGTILMAQQIKTTPLKKLKPEGFQLDLKHET
PVTRSHTQCVVDAGLFMGRSFGVAWGPNGTLIHAGKPVCGSDSQKGLSSVIHLEKIAIDK
VVRDEKKKVREELVDFAFDSLLNLHKEINHDTKEKEFGSFKLKLQKLVSNQLQLSEICRS
YAEIIQKQLEVPGLSSSARSGLMHQIMVWELIKVLFSERENNREMKPSSTDNEEDMMQDQ
DAKEASLDVDLEALPLIRRAEFSYWLQESVCGHVQDDISSLNETDYLQHIFLLLTGRQLD
TAVELAVGKSDVRLACLLSQAGGSMVNRSDVARQLDLWKINGLDFNFIEKDRIRLYELLS
GDIHGSLYNIDIDWKRFLGLLMWYKLPPHASLPVVFHTYQHLLEDGKAPSPVPVYVDEGF
EEEAVNWKSKERFDISYYLMLLHASDETQPEFLKNMFSAFSSTHDPLDYHMIWHQRAVLE
AIGVISSDDLHVLDVALISQLLCLGKCHWAIYVVLHMPYREDFPYLQANLIREILFQYCE
SWSTQESQRQFIENLGVPVAWLHEALAVYYNYIGDLSKALEHFLQCAHWPKAHTIFITSV
AHTLFLSGKHSEIWKLATSMEDHKSEIDNWDLGAGIYISFYFLRNSLLEDNDTMSELDSL
ESKNSACSKFIDQLNNSLAVLGDRLPVDARVAYSKMGEEICSLLLSGVGEGRTRDMQLSC
FDTVSNAPIPEEVRSSHLQDAASLFTCFLSELAAPT
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccactgcctcggtctccggtctccggggcctctgttgaacttgatggtagg
agtacagtcagtacttcctgtgctatggattttgctgcagaaatttctagttcacaagat
gtactccaaaagagaatgagagagattgaaactcttctacctactctacagaagcctgag
tattatatggagccatgctttgatgagttggtctcgagggaattgatggatcctggttat
tctagccgagttccagatttcacagttggaagatatggttttggttcagtcaagtatatt
ggagaaactgatgttaggtggctgaatctagacgatattgtaaccttccataggcacgag
gtagttgtatatgaagatgaaagtaccaagcctttggttggtcagggccttaacaagact
gctgaggtgactttggtgctaaaattaacatcctcaactattgaggaggatcagaaagaa
agtgtggtgggtaaattaaggcagagtgcccagagacaggaggctcagtttgtatcattt
gactccgctaatggtgaatggaaattcttggttcagcattttagtaggttcggattaagc
gaggatgatgaagacgatatggtaatggatgatgctcctgcagttcaagagccaacagcg
atgattggtgaggagatctctgacattgatgaacaaccacaatttgataattctggaaac
ttgctttctcattctcttcctactcatcttgggcttgacccaataaagatgaacgaattg
agaatgttgatgttccgtgatgaggaagaggacagtgatgatttcgatcaatttcttagt
catcagaaatcatcctttaataaagaatctgtcaaaccacctctgcagaatttgacaccg
atgaatcatagagctactccactagttgcccgcaaaactccattggcattgcttgagtac
aagcatggaagttttgattcgaactctcctggtaccattttgatggcccaacaaattaaa
actacacctctcaagaaattaaaaccagaaggttttcagctggacctcaagcatgaaaca
ccagtaactagaagccatactcagtgtgtagttgatgcgggtttgttcatgggtaggtca
tttggggtagcgtggggtccaaatggaacactcattcatgctggtaaaccggtttgtggt
agtgattctcagaaggggttgtcttctgtgatccacttggagaagattgccattgacaaa
gtggttagagatgagaaaaagaaagtgagagaggaactagtggattttgcatttgattct
cttctaaatctccacaaagaaataaatcacgatacaaaagaaaaagaatttgggtctttt
aaattgaagcttcaaaaacttgtatctaatcaattacagctttcagagatttgtagaagc
tatgcagagattattcagaaacagctagaagtacctgggttgtcatcttctgcccgctct
ggtttgatgcaccaaataatggtatgggagttgataaaagtccttttttctgaaagagag
aataatagagaaatgaaaccttcgagcacagacaatgaagaagatatgatgcaggaccag
gatgcgaaggaagcttctcttgatgttgatcttgaagcactccctctaatcagaagggca
gagttcagttattggctgcaagaaagtgtttgtggtcatgtacaagatgacataagttcc
ctaaatgagactgattatcttcaacatatatttttactcctgactgggaggcagttggat
actgccgtggaactggccgttggtaaaagtgatgtaagacttgcttgtttattaagtcag
gctggtggttccatggtgaatcgttctgatgttgcaaggcagcttgacctttggaaaatc
aatgggctggattttaatttcattgagaaggataggataaggctttatgagttgctttct
ggtgacattcatggctctttgtacaacattgacattgactggaagaggtttctaggttta
ttaatgtggtataaactacctcctcatgcttcactgcctgttgtctttcacacttatcaa
catcttcttgaggatggaaaagctccatctcctgttccagtttatgtcgatgaaggattt
gaagaggaggctgtaaattggaaatcgaaggagcgttttgacatctcatactatcttatg
cttcttcatgcaagtgatgaaacacaacctgaatttttgaagaatatgttcagtgccttc
tcttcaacacacgacccacttgattatcacatgatatggcatcagcgtgctgtgttggaa
gcaattggtgtcatcagttctgatgatcttcatgttcttgacgtggcacttatttctcaa
ctcttgtgtttaggcaaatgccattgggccatctatgtggttctccatatgccttatcgt
gaagattttccttatcttcaagctaatttaattcgggagatcttgttccaatactgtgaa
tcgtggagtactcaagaaagtcaacgtcaatttatagaaaatctaggcgttccagttgca
tggctgcacgaagcactggcagtttattacaattatattggggatctctctaaagccctg
gaacactttcttcaatgtgctcattggccgaaagctcataccattttcataacctcggtt
gcacatacactattcttgtcaggcaaacattcagagatatggaagcttgcaacttcaatg
gaagatcataagtcagaaattgacaattgggacttgggagctggaatatacatttcattc
tattttctaagaaattcacttcttgaagataatgataccatgagtgaactggattccctt
gagagcaaaaactctgcctgtagtaaattcatcgatcaattaaacaattctctggcggtt
ttgggtgatagattaccagtcgatgccagagtggcttactcaaagatgggtgaggagata
tgcagcttactattgtcgggtgttggtgagggcagaacgcgcgatatgcagctaagctgc
ttcgacacagtgtctaatgctccaatacccgaggaagtccgatctagtcatctgcaggac
gcagcctctcttttcacttgctttctttctgagctggctgcaccaacctaa
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integrated database retrieval system
