Cannabis sativa (hemp): 115707916
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Entry
115707916 CDS
T08987
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115707916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115707916
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115707916
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115707916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
115707916
NCBI-ProteinID:
XP_030491878
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Position
1:47332255..47333679
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AA seq
277 aa
AA seq
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MSLLPKSDSIHIREVWDGNLEDEFALIREIVDEYPYVAMDTEFPGIVLRPVGNFKNSYDF
HYQTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL
LRQSGIDFMKNNENGIDVKRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQDLP
ETQLGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS
CTFRKLKENFFSGSMTKYAGVLYGLGVENGQNITQPY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttgccgaaatccgattcgattcatattcgcgaggtttgggatggaaatcta
gaggacgagttcgctttaattcgagaaatcgtggatgagtatccttacgttgctatggat
acggagtttcccggaatcgttctccgtccagtgggaaatttcaagaacagttacgacttc
cattaccagactttgaaggacaacgttgatatgttgaagttaattcaattgggtttaaca
ttttccgacgaagatggtaacttacccacttgcggaacagataagtattgcatttggcaa
ttcaatttccgcgaattcaatgtcaatgaagatgttttcgccaacgattcgatcgagctt
ttgcgccaaagcggtattgatttcatgaagaacaacgaaaatggcattgatgttaagcga
tttggggagcttctaatgtcatctgggattgtgttgaatgacaatgttcattgggtaact
tttcatagtgggtatgattttgggtacttgcttaagctcttaacttgccaggatttacca
gaaacccaattagggttcttcaacttaatcaacatgtacttcccaacagtttatgatatc
aaacacttgatgaagttctgtaacagccttcatggtggattgaacaagctagctgagttg
ttggaagtggaaagagttggcatatgtcatcaggcaggttcggatagtttgcttacttct
tgtacattcaggaaacttaaagagaacttctttagtggttctatgacgaaatatgctggt
gttttgtatggattaggagttgagaatggacagaatattactcagccttactga
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