Cannabis sativa (hemp): 115708143
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Entry
115708143 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115708143
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115708143
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115708143
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115708143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115708143
NCBI-ProteinID:
XP_030492205
UniProt:
A0AB40ECU9
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All DBs
Position
1:12538480..12542504
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AA seq
187 aa
AA seq
DB search
MDGPPENDCCAVCHGSFNIPCQANCSHWFCGGCIMLVWHHGSALQPCKCPLCRREITLLV
PSEASLRQRHENDAEEVLGKIERYNRYFAGRTLGLFQRLQDLPFFLRRLLRELMDPQRSL
PLVIRARIYIAMAMSGVYVLSPVDIIPEGILGIVGLLDDLIIILIFFFHVAAIYRSVLHF
RHGGSSS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcctccggagaatgattgctgtgcagtatgccatggcagcttcaacattcct
tgtcaagccaattgctcccactggttttgcggaggttgtattatgcttgtttggcatcat
ggatcagcattacagccgtgtaaatgtcctctttgtcgacgtgaaattacattgttggtt
ccaagtgaggcttcattaagacaacgccacgaaaatgatgctgaggaggttctgggaaag
attgaaagatacaatcgatattttgctgggcgtactcttggtctttttcagagacttcaa
gaccttcctttctttttacggaggttgttacgagaactaatggatcctcagcgatctctc
ccccttgtcataagggcacgtatctacattgcaatggcaatgagcggtgtttacgtactc
agtccggttgatatcattccagaaggcatactgggtatagttggtctgttggatgatctc
atcattatacttattttcttctttcatgttgctgccatttatcgctctgttctccatttt
cgtcatggcggttcttcttcttga
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