Cannabis sativa (hemp): 115708219
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Entry
115708219 CDS
T08987
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115708219
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115708219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
TGF_beta
Motif
Other DBs
NCBI-GeneID:
115708219
NCBI-ProteinID:
XP_030492299
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All DBs
Position
X:complement(44615198..44619952)
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AA seq
444 aa
AA seq
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MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVASAVNALQY
YANVQPAIRGRNVYVQFSSHPELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTTLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGRPSQPGYGDAGGMYGMQPSGTRGVPFPQMANAAAIAA
AFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYR
YCCSPTKIIHLSSLPQDVTEEEIVNHLEEHSPIVNTKLFEMNGKKQALVMFESEELATEA
LVTKHASSLGGSIIRISFSQLQTI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccttccaaagtcatccacgtcaggaatgttgggcatgaaatatcagaaaat
gatttgcttcagttatttcagccatttggggttataactaagcttgtgatgcttcgggcg
aaaaatcaggctcttatccaaatgcaagatgttgcttctgcggttaatgcgctccaatac
tatgcaaatgttcaaccagccataagggggagaaatgtttatgtccaattctcatcccat
ccagaattgacaacaatggatcaaaacgctcaaggacgaggagatgagccaaaccgaatc
ctcttagttacaattcatcacatgctatatcctataacggtggaagtgctgcatcaagtg
tttttcccccacggatttgtggagaagattgtcacatttcagaagtcagctggttttcag
gccctcattcagtaccaatcacgccaaagtgctgtagcagctaggaccacgctgcaggga
cgcaatatttatgatggttgttgccaactcgatattcagttctccaaccttgacgagtta
caagtgaattacaataatgagcgttcaagggattttacgaaccctaatcttccttcagaa
cagaaaggaagaccctcacaacctgggtatggtgatgcaggaggcatgtatggcatgcaa
ccttctggaacaaggggagttccatttccgcagatggcaaacgccgctgcaattgctgcc
gcttttggtggaggtttgcctccaggtataagcgggacaaatgacaggtgtacagttctt
gtctccaacctaaatcccgatagaatagacgaggataagctttttaacctgttctccatc
tacggaaacattgtaaggatcaaacttctccgcaacaaaccagatcatgccctcgttcag
atgggtgatggcttccaggcagaactggcagtgcatttcttgaagggtgcaatgctgttc
ggaaagcgtttggaagtcaacttctcaaagcatccaaacataacacagggtgccgacacc
cacgagtacatgaactctaatctcaaccgctttaaccgcaacgcagccaagaactaccgc
tactgctgctccccaacaaagattatccatctatcctctctcccccaggatgtcaccgag
gaagagattgtgaaccacctagaggaacacagtcccatcgtcaacacaaagctctttgag
atgaacggtaagaaacaggctctggtaatgttcgaaagtgaggagctggcaactgaggct
ctcgtcaccaagcatgctagctcgcttggcgggtcaattatccgcatctccttttcccaa
ctacagacaatataa
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