Cannabis sativa (hemp): 115708351
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Entry
115708351 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115708351 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115708351
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115708351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
115708351
NCBI-ProteinID:
XP_030492459
LinkDB
All DBs
Position
1:52897117..52920117
Genome browser
AA seq
2546 aa
AA seq
DB search
MDKETEILSRLAANHIHLAQFEPLRAVIIALRDRNPELALAVLQTIVSHSGRFENVLWSS
SCPSPSLLTFLATLELLQFDNATSVWSFDPESLRLRAEFLLLVQLLIDRVSEYMRRNFDL
ESIGTKERENDGLGESESESFEKRAEFLKKSEDKIDDLRASSGEWENSVGVLDRIFELGV
KRLKVDDDDADRDNRIQNPAAATIIEDGDLVCLRKVIWEYADVFDALCLNIQRQIRGGWE
GYDPSDLAITTQTEENATKSEAEDEDMEVLCSIQRTVQLAHLDAIKECAKEGNVNKAALH
IRFLHFDYGVEESEYRIVLQDLLKVVSLGWEEYGDSWHINKEKLLIIYGAALASNCRFLI
QMLQVLHDGLLLKEIELYQSLDNNQIPPPLECFQRYVKELDLDSDLRNKTLSVNSVVSSC
LRDMYQYARVSRQHVLECVMDTALSAVKRNQLEETSNIFSLFPRLQPLVASMGWDILSGK
TTERRELMQLFWTSKSQVLRLEESSLYGNQSDEISCVEHLCDSLCYQLDISSFVACVNSG
RAWNSKFSLMLSGKEQISFGSDDAQLDPFVQNFVLERLSVQSPLRVLFDVVPHIEFQDAI
KLISMQPAASSSATWQRLQDIELMHMRYALESAVLALRAMQKSMSGERESHHQEPFCHLK
DLQSHTDAITNIPRKIMMVNVIISLLHMDYLSLNLAHCMSSQSRTESPDTCVWEHNDLGT
SEGANKMVLSFIGLLLDILRRNVPSTVTELRNAQIDGLTTSGRHALEWRVSIANRFIEEW
EWRLSILQRLLPLAERQWRWEEALTVLRAAPSKLLNLCLQRSKYDIGEEAVHRFSLSAED
KATLELAEWVDNAVRRESVEEVVSCAADGTSMVQDLDFSSLRTQLGPLAAILLCIDIAAT
SARSAKISQQLLNQAQVMLSEIYPGVSPKIGSTYWDQIREVGVISVSRRVLKRLNELLDK
DNPPAIQGILSGELIISSQKETLRQGQRERALAMLHQMIEDAHQGKRQFLSGKLHNLARA
IADEEAEPNFLKGEGQPSDQKAFSDFDKEGVLGLGLRIIKKKALPSPPGDFSEQPVDYDV
KETGKRLFGPISNKPTTYLSQFILHIAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLV
FDRGSTDAASKMAEIMCADFVHEVISACVPSVYPPRSGQGWACIPVPLCIKNGTENKLPS
PSSKGEPNCHDWSSILPGIPLYPLQLDIVKHLVKISPVRAVLACVFGSSILYSGSASSTS
SSWHGELLEAPDTNRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTTKQTADSSRV
KDEVRAALKRLHEHDSDTESEVDENVGGTNMPTNLSSFNSQSGAAPDTSWQDAMKTDVPE
HDNSVFLSFNWENEEPYQKAIERLIDEGKLMDALALSDRFLRKGASDQLLQLLIERGEEN
QSISGQNQSYGGHGIWSNSWQYCLRLKDKQLAARVALKYMHRWELNAALDVLTMCSCHLP
KSDPITNEVMHMKQALQRYSHILSADNHYSSWQEVEAECKQDPEGLALRLAEKGAVSAAL
DVAESAGLSIDLRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDSDDALPVAMGAMQ
LLPNLRSKQLLVHFFLKRREGNLSDTEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPH
LLLEVLLMRKQLQSAALILKEFPSLRDNSLIISYAAKAIVFNFSSPAREPRVSISGMRPK
QKTRTGTPVRSSFSNSLSNLQKEARRAFSWGPRNTGDNPAPKDSYRKRKSSGLSPSERVA
WEAMAGIQEDHVSTYSVDGQERLPSVLITEEWMLTGDTIKDDAVRLSHRYESAPDITLFK
ALLSLCSDESVSAKNAMDLCVNQMKNVLSSRQLPENASMEVIGRAYYATEIFVQGLQYAK
SLLRKTVGVSDFSSNSERSRDTDDASSDAGSSTIGSQATDELSEVLSQADIWLGRSELLQ
SLLGSGIAVSLDDIADKESSARLRDRLIVDERYSMAVYTCKKCKIDIFPVWNAWGLALIR
MEHYAQARVKFKQAFQLYKGDPEPVITEIVNTIEGGPPVDMLSVRSMYEHLAKSAPTILD
DSLSADSYLNVLYMPSTFPRSEKSRLFPECANDNSTYGSEFEDGPRSNLDYNRYNECVNY
LQEYARQKLLEFMFRHGQFNDACMLFFPPNAVPLPPQPSTVGVATSSSSPQRQDNLATDY
GTIDELCDLCVSYGAMPVLEEVISARMAATEPQDEAVSQYTAAVLARICLYCETHKHFNF
LYQFQVIKKDHVAAGLCCIQLFLNSAFLEEAIKHLEHAKMHFDEGLSARYKGDSTKLVTK
GVRGKSASEKLTEEGLVKFSARVSIQVEVVKSYNDADGPQWLYSLFGNPNDPETFRRRCK
IAESLVEKNFDLAFQVIYEFNLPAVDIYAGVAASLAERKKGSQLTEFFRNIKGTIDDDDW
DQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQY
VAHQALHAPNALPVLDMCKQWLAQYM
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaactgaaatcctctctcgccttgccgccaaccacatccatcttgcccaa
ttcgagcctctcagggcagtaatcatcgcgctcagagaccgaaatccagagcttgctctt
gctgtgcttcagacgatagtttctcactctggacgttttgaaaacgttctatggtcttcg
tcttgtccgtctccgtcgctacttacgttcttggccactctcgagctcttacagtttgat
aatgcgacatctgtttggagcttcgatcccgagtcattgcgtttgcgagccgagtttttg
ttgttggttcagctcttgatcgatcgggtctcggagtatatgaggaggaattttgatttg
gagagcattggtactaaggagagagagaatgatggtttaggtgagagtgagagtgagagt
tttgaaaagcgagctgaatttctaaagaagagcgaggataaaattgacgatttgagagct
tccagcggtgaatgggagaattctgttggtgttttggatagaatttttgagttgggagtg
aagaggttgaaggtggatgatgatgatgctgatcgtgataatcggattcaaaatccggcg
gccgctactattattgaggatggagatttggtgtgtttgaggaaggtgatttgggagtat
gcagatgtttttgatgccctgtgcttgaatatacagaggcaaataagaggaggctgggaa
ggttatgacccttctgatttagctattacaacacagactgaagagaatgcgactaagtct
gaggctgaggacgaggacatggaggttctttgttctatacaaaggactgttcaattagct
cacttagatgctatcaaagagtgtgctaaggagggaaatgtgaataaggctgctttgcac
attcgttttcttcattttgattatggagtcgaggagtctgagtatcgcattgtattgcag
gatttactgaaggtggtttctctaggatgggaggaatatggagactcttggcatattaat
aaggaaaaattgttgataatttatggtgcagctcttgcatctaattgtagatttctcatt
caaatgttacaggttctccatgatggattgcttctaaaagagattgagctgtatcaatct
cttgataataaccaaattccacctcctttggagtgtttccaaagatatgttaaagaatta
gaccttgattctgatttacgtaataaaactctgtccgtaaactctgtggtcagttcttgc
ttgagagacatgtaccaatatgctcgagtctctagacaacatgttcttgagtgtgtcatg
gataccgcgttgtctgctgtgaagagaaatcaacttgaagaaactagcaatatcttttca
ctgtttccacgtctccagcccctggtagcttctatgggttgggatatattatctggcaag
acaacagaacggagagaattaatgcaacttttctggactagtaagtctcaagtactccga
ctggaagagtcttctctttatggaaaccaatcagatgagatatcttgtgtggaacatctc
tgtgattcgttatgttatcaacttgatatttcctcatttgttgcatgtgtcaattctggt
cgagcttggaattcaaaattttcattaatgttgtctggaaaggagcaaatatcctttgga
agtgatgatgctcaattagacccatttgttcaaaattttgtgctggaaagactttcagtt
caaagtcctcttcgggtattgtttgatgttgtgccacacatagaatttcaagatgccatt
aagttgatcagtatgcagccggctgcctctagctcggcaacctggcagaggctgcaggat
attgaacttatgcacatgcgttatgcactagagtcagctgttcttgcacttcgagcaatg
cagaagagcatgtctggtgaaagagaaagtcatcatcaagagcccttttgtcatttgaaa
gatctacaaagccacacggatgctattactaatattccacgcaagataatgatggtgaat
gttataatttcactattgcacatggattatctctctcttaatttggcgcattgcatgtca
tctcaaagtcgtactgagtcacccgatacttgtgtgtgggaacataatgatctcggtaca
tctgaaggggcaaacaaaatggttctatctttcataggattgctacttgatatactacgt
cgcaatgttccctcaactgtaactgaactacgaaatgctcaaattgatggtttgactaca
agtggaagacatgcgctagagtggagggtgtcaatagctaatcgtttcattgaagaatgg
gaatggcggttgtcaattttgcagcgtcttcttcctttagctgaacgccagtggagatgg
gaggaagcattgactgtgctacgtgcagccccatctaagctacttaacctctgtttgcaa
agatcaaagtatgacatcggagaagaagctgttcatcgattttcattgtccgcggaagac
aaagcgaccctagaattagctgagtgggtggataatgctgttagaagagaatctgtggaa
gaagtggtgtcttgtgctgctgatgggacttctatggtgcaagatctagatttttcatct
ttacgcacccaattaggtcctttggctgctattcttctttgtatcgatattgctgctact
tctgcacggtcagcaaagatctctcagcagcttctgaatcaggctcaagttatgttatct
gagatttacccaggtgtctctcccaaaataggctctacatactgggatcaaattcgtgaa
gtaggtgttatttctgtctcacgaagggtccttaagcgtctaaacgagctcttagataag
gacaaccctccagctattcagggtattttgtctggagagctaatcatttcttcgcaaaaa
gaaactcttcgacagggacaaagggaacgtgctcttgctatgctgcatcagatgattgaa
gatgctcaccagggaaaacgacagtttttgagtggtaagctccataatctagcaagagct
atagcagatgaagaagcagaaccaaattttcttaaaggtgaaggccagccttctgatcag
aaggctttttctgattttgacaaggaaggggttcttgggctagggctaagaattataaag
aagaaagctttaccttcaccccctggagattttagtgagcagcctgtggattatgatgta
aaggagacagggaagagattatttggtcccataagtaacaagcccacaacctatctttca
cagtttattcttcatattgctgcgattggtgacatagtagatgggactgatacaactcac
gacttcaactttttctcacttgtgtatgaatggcctaaggatcttttaactcgcctcgta
tttgaccgtggtagtactgatgctgctagcaagatggctgagattatgtgtgctgacttt
gttcatgaagttatttcagcgtgtgtgccgtcagtgtatcctccacgctctggtcaagga
tgggcttgcattccagtacccctttgcattaagaatggcacagagaataaactaccatca
ccttcttcaaaaggtgaacctaattgtcatgactggtcatcaatattacccggcatccct
ctctaccctttacagctggatatcgtaaaacacttggttaaaatatcgccagttagggca
gtattggcatgtgtttttgggagtagcattttatacagtggaagtgcctcctctacatca
agctcttggcatggtgaattgcttgaagcacctgatacgaatcgtttgttttacgagttt
gctcttgatcaatcagagaggtttccaactttaaaccgatggatacaaatgcaaacaaat
cttcatcgggtttcagagtttgcagtaacaaccaagcaaactgctgatagcagcagagtt
aaagatgaagtaagagctgctttaaagagacttcatgagcatgatagtgatacagagtcc
gaggttgatgaaaatgttggtggcactaatatgcccacaaatttatcatcttttaacagc
caaagtggtgcagctccagatacatcttggcaagatgccatgaaaactgatgttcccgaa
catgataattcggttttcctttcttttaattgggagaatgaagaaccctatcagaaagca
atagaacgattaattgatgaaggaaaactaatggatgctcttgcactttctgatcgcttt
ctacgtaagggagcctcagatcagttgctgcagctacttattgaacgaggggaagagaat
cagtcaatctctgggcaaaaccaaagttatggaggccatggcatttggagcaatagttgg
cagtattgcctgcggttgaaggacaagcagctagctgctagagttgccctcaagtatatg
catagatgggagcttaatgctgccttggatgttcttaccatgtgcagctgccacctgcct
aaaagcgatccgattaccaatgaggtgatgcacatgaaacaagctttgcagagatacagt
cacatattaagtgcagacaatcattatagtagctggcaagaggtggaagctgagtgtaag
caagatcctgagggcttggcacttagattagctgagaaaggagctgtttcagctgcctta
gatgtagctgaaagtgcaggattatcaatagatttgcggagagaattacagggtcggcag
cttgttaaacttctcactgcagatcctcttaatggtggaggtccagcagaagcttcacgc
tttctttcttcattacgtgactcagacgatgctttgccagttgcaatgggtgcaatgcag
ctgttacctaatttgcggtcaaagcaacttcttgttcacttctttctgaagcgaagagaa
ggaaatctctctgatactgaggtttcccggctgaactcatgggcattgggtctacgtgtt
ctggctgccttgccattgccttggcagcagagatgttcttccttgcatgaacaccctcat
ttgcttttggaggttttgcttatgaggaagcaactgcaatcagctgcgctgattcttaaa
gaatttccatcgttgcgagacaatagtctaattatttcatatgcagctaaagcaattgta
ttcaattttagctctcctgcaagagaacctcgagtttctatttcaggaatgagaccaaag
cagaaaactagaacaggcacacctgtgagatcatccttctctaatagcttaagtaacttg
caaaaggaggctcgtagagcgttctcttggggtccacggaatacaggagacaatcctgcc
ccaaaagattcctatcggaaaagaaaaagttctggattgtccccatctgaaagagttgct
tgggaagcaatggctggcattcaagaggatcatgtttcaacttattctgtagatggacag
gagcggcttccttctgtgttgattactgaggaatggatgctgactggtgataccatcaag
gatgatgcagttcgtctatctcaccgatatgaaagtgccccagacattactctcttcaag
gcccttctttctttgtgttctgatgagagtgtgtcggccaagaatgcaatggacttgtgt
gtcaatcagatgaagaatgtgttaagctctcgacaattgcccgagaatgcatcaatggaa
gttattggtcgtgcttactatgccactgagatatttgtacagggtcttcaatatgctaaa
tccttgctgagaaagacagtgggagttagtgatttttcaagtaattctgaaagaagcagg
gatactgatgatgcatcttcagatgctggtagttctaccatcggcagtcaggcaacagat
gagctatcagaagttttatcacaggcagacatttggctaggacgttctgagctacttcaa
agtcttctaggctctggaattgctgtttctttagatgatattgctgataaagagtcatct
gctcgtctccgtgacaggttgattgtggatgaacgatatagtatggctgtgtatacttgc
aagaagtgcaagattgatatattccctgtatggaatgcatggggtcttgctttgattcgt
atggagcactatgcacaagctcgtgtgaagttcaagcaagctttccaattgtataagggg
gatcctgaacctgttattactgaaatcgtaaatacaattgaaggaggtcctccggtggat
atgttatctgttcgttcaatgtatgagcatttggccaagagtgctccaacaatcttagat
gattctctttcagcggattcgtatctcaatgtgctgtacatgccatccacttttccacgc
tctgaaaaatcaaggctgtttccagaatgtgcaaatgataattctacatatggttcagaa
tttgaagatggacctcgcagcaacttggactacaatcgatataacgagtgtgtgaactat
ttgcaagaatatgcacggcagaaattgcttgaatttatgtttaggcatggtcaattcaat
gatgcctgcatgttgtttttccccccaaatgctgtccctcttcctcctcaaccatcaacg
gtgggggttgcaacatcttcttcatcccctcaaagacaagataatttggcgactgattat
gggactattgatgagctgtgtgatctgtgtgttagttatggcgcaatgcctgttttagag
gaagtgatatcagcaagaatggcagctacagagccacaagacgaagcagtgagccagtat
acagctgcagtgcttgcccggatttgtctatactgtgaaacgcataagcatttcaatttt
ctgtaccaatttcaggttatcaagaaagaccatgttgctgctggactttgttgcattcag
ttgttcttaaattctgcttttctagaggaggctataaaacatttggaacatgctaagatg
cattttgatgaagggttgtcggctcgatataaaggtgattctactaagcttgtcacaaag
ggtgtcaggggaaaaagtgcatctgagaagcttactgaagaagggcttgtgaagttttct
gctcgggtttcaattcaggttgaagtggtgaagtcctacaatgatgctgatggaccgcaa
tggctatactcactctttggtaacccaaatgatccggagacattcaggaggagatgcaaa
attgcagagtctcttgtggaaaagaattttgacttggctttccaagtgatttatgaattc
aaccttcctgctgtggatatatatgctggtgtggctgcatcacttgctgagagaaaaaaa
ggaagccagttgacagaattctttagaaacatcaaagggactattgacgatgatgattgg
gatcaggtactgggagctgctataaatgtatatgctaacaaacacaaagaacgccctgat
cgtctcattgacatgttgactagtagccacaggaaagttcttgcttgtgtggtttgtggt
cgtctaaaaagtgcattccagattgcttctcgcagtggaagtgtagctgatgttcagtat
gtagctcatcaggcgttacatgcaccaaatgcactccctgtactagatatgtgcaaacag
tggttggcccaatacatgtga
DBGET
integrated database retrieval system
