KEGG   Cannabis sativa (hemp): 115708707
Entry
115708707         CDS       T08987                                 
Name
(RefSeq) protein PAT1 homolog
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115708707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csav03019]
    115708707
Messenger RNA biogenesis [BR:csav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115708707
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     115708707
SSDB
Other DBs
NCBI-GeneID: 115708707
NCBI-ProteinID: XP_030492560
LinkDB
Position
3
AA seq 827 aa
MEAFERGSSIQETPNHEDLKQLGNDSTGEVFDASQYAFFGNDVLEEVELGGLDDEEVEMP
ATGFEEEEFLYGKEEAPISRSLSDIDSLASAFSKVVSGSRNMGPVGDVVSRESSSVTEWA
QEEFPNWNDHQMIESDSMSEGKRWSSQPFSSAARLLESNSLYRTSSYPEQQQQQQQYQHQ
QQHQPHFSSEPIPVPKSSFTSYPPPGGRSQQASPNQHSGHPNMPYLAGGPQGGLSSPNLS
PFSNSQLQLAGLPHGSHFGGSVPQLTPGLSANNNRMPNQWANQSGMYPGDHPGMLNSMLQ
QQLSHQNGIMPPQIMAQQQQQQQQQRMHHSVQPSFNHMSGMQSQLFNPHLPPSPPLMGKF
DAMLGPGDQRPKMVQKGRPFRFPQMGSDMNNHRNDVGWPQYRSKYMTSDEIEGILRMQLA
ATHSNDPYVDDYYHQASLAKKSSGAKLRHHFCPNHLRDLPPRARPNNEPHAFLQVDALGR
IPFSSIRRPRPLLEVDSPTLSGSGGTEQKDTEKPLEQEPMLAARVAIEDGLCLLLDVDDI
DRFLQFNLLPDSGTQLRRRRQAVLEGLAASLQLVDPLGKNSHTVGPVPKDDLVFLRLVSL
HKGRKLLARYLQLLFPGGDLMRIVCMAIFRHLRFLFGGLPSDPGAAETTDNLAKVVATCI
CEMDLGSLSACLAAVVCSSEQPPLRPLGSSSGDGASLILKSVLERATELLTDPHVASNYN
MTNRSLWQASFDEFFGLLTKYCVNKFDSIMQSLLVQGPTNMAAIGADAARSISRELPVEL
LRASLPHTNDQQRQVLLDFTRRSMAVSGSNIHNGGNDGRMNSESVPS
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggaagcgttcgagcgtgggagtagtattcaagaaactcccaatcatgaagatctcaag
caattgggaaatgattccacaggtgaggtttttgatgcttcacaatatgcattctttgga
aatgatgtccttgaagaagttgagttaggaggattagatgatgaagaagtggaaatgcct
gctactgggtttgaggaagaggagtttctttatggtaaagaagaggctcctatctcaagg
tctctatctgatattgatagcctagcaagtgcattttcaaaggtagtaagtggatcgaga
aacatggggccagttggtgatgttgtatccagagaaagctcatctgttacagaatgggca
caagaggagtttccgaattggaatgaccatcagatgatagaaagtgatagcatgtctgaa
ggcaaaaggtggtcttcacagccattttcttcagctgctcgcctcctagaatcaaactct
ttgtacagaacttcatcgtatcctgagcagcaacagcaacagcagcaataccaacaccaa
caacaacatcaaccacacttttccagtgaacctattccagtgcctaaatcttccttcact
tcttatcctccaccaggtggcagatctcaacaagcatcacctaatcaacattcaggtcac
ccgaatatgccgtatcttgctggaggacctcaggggggattatcttcaccaaacctttcg
ccattttctaactcacagcttcaactggccgggttacctcatggatctcattttggtgga
agtgtgccacaacttactcctggtctgtctgctaataataaccggatgccgaaccaatgg
gctaatcaatctggcatgtatccaggagatcaccctggaatgttaaatagtatgttacag
caacagttgtctcatcaaaatggtataatgcctccacagataatggctcagcagcagcag
cagcagcagcaacagagaatgcaccattcagttcagccatcatttaaccatatgtcagga
atgcagtctcaattatttaatcctcatcttcccccttccccacctttaatgggcaaattt
gatgcaatgctcggtcctggtgatcaaagaccgaaaatggttcagaaaggcagacccttt
cgatttcctcagatgggttctgatatgaataaccataggaatgatgttgggtggccacag
tacagatccaagtacatgacatctgatgaaattgagggtattctcagaatgcaacttgct
gcaacacatagtaatgacccatatgtagatgattattaccatcaggccagtcttgctaaa
aaatcttctggcgctaagctgagacatcatttttgcccaaaccacttgagggatcttcca
ccacgagcacgacctaataatgaaccacatgcttttcttcaggttgatgctcttgggagg
attcccttctcttctattcgtaggcctcgtcctcttcttgaagtggacagtccaacttta
tcaggctctgggggtactgaacagaaggatactgagaagcccttagagcaggaaccaatg
cttgctgctagagttgcgattgaggatgggctctgtcttcttcttgatgtagatgacatt
gaccgcttcttgcaattcaatctgctccctgacagtggaacgcaattgagacgtaggcga
caggctgtgttggaagggcttgctgcatcacttcagttggttgatccacttgggaaaaat
agtcatacagttgggcctgttccaaaggatgatcttgtgttcttaagattagtctctcta
cacaagggtcgtaaacttttggcacggtaccttcagcttctattccctggtggtgatctc
atgcgaatagtttgtatggccatattccgtcacttacggttcttgtttggtggactaccc
tctgatcctggagcagcagaaactacagataaccttgcaaaggttgttgcaacatgcatt
tgtgaaatggaccttggttctcttagtgcttgtcttgcagcagtggtttgttcatccgaa
cagcctccacttcgtcctcttggcagttcttctggagacggggcttctctaatcctgaaa
tcagttcttgagagagcaactgaactattgacagatccccatgttgctagcaactataat
atgacaaaccgatctctttggcaggcttcatttgatgaattttttggccttttaactaag
tattgcgtaaataagttcgatagtatcatgcagtctcttcttgttcagggcccaaccaat
atggctgctataggagcagatgcagcaagatctattagtcgtgaattgccagtagaactt
ttgcgcgcaagtcttccacacaccaatgatcaacagaggcaagtattgttggatttcact
cgacgatccatggctgtgtctggatctaacattcacaatggaggaaatgatggacggatg
aattcagaatcagtaccgagttaa

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