Cannabis sativa (hemp): 115708746
Help
Entry
115708746 CDS
T08987
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115708746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115708746
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115708746
FA (Fanconi anemia) pathway
115708746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
115708746
NCBI-ProteinID:
XP_060967170
LinkDB
All DBs
Position
3:42974859..42982544
Genome browser
AA seq
681 aa
AA seq
DB search
MGRRRLVYYSDEDEGENNNNQPQPQTQSQTHPEQPSSLPSSPSPTTNNEAHVSPLEISDD
GDFVEVSDDDEEFIDVSDNLSPPSPPSPPAPAPHSDHHMPHPSTFGCPVGDFLQGLGLRL
KREWLDACVQGLERSVPGFEGLNVNVKAKLCFERFLVSDMNQFGGGLLPENVHSLHLVDL
PGRYVLQVDEIVNISCPLKSRYQKAAPGIKRCLKLSMTDGVQRVFGMEYRPIKDLDALSP
AGLKVVICNVHVRHGLLMLVPETFEVLGGLVQEMEEARQRLVDEVNKPPRGIRTRNRELP
PLRTRATLAAWSSSNDHVPGNNHNTTSDFRTPLQVHQAAATHVAPSTNTNQRMEEDIPGR
VNEENYNPNPSANVHDVEESPDTYVAPGNVAGQRNKEELSGRVSGENFSRNPSANVTFGE
DGSPAPASAESVISKAPRSVVAGIEHLHMNSIGPNSASGSRPTGQSSDVASVMDETDTDT
VPPTTRYPVSDPYLNDNEDTIMVDLVQHPLILSGAREPPFTYLSSLSAKLAAMTGRVHSV
KGMIKCFLTGVKGFQYREKATYDLRVFVDDGSLIKEIRIHHNLVQKLIGHSPREVMAALA
SPDTGIVNNIKETLRNFQNFLASFEGKMLIEMHDHHEHPVAVEMNVGCPESDALLLLRRV
KSSFSSPQTRSLPVDPIDLSP
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacgtaggctagtttactattcggatgaagatgaaggagagaacaataacaat
caacctcaaccccagacccaatcccaaacccaccccgaacaaccttcttctctcccttca
agtcctagtcctactactaataatgaggctcatgtttcaccccttgaaatatccgatgat
ggtgattttgttgaagtttcagatgatgatgaggagttcatagacgtctctgacaacctc
tcacctccttcacctccttctccgccagctccagcgccacattctgatcaccacatgcct
catcctagtacattcggttgccccgttggtgactttcttcaagggcttggattaaggctg
aagagagaatggcttgatgcttgtgttcagggacttgaacggtctgtaccgggctttgaa
ggcctcaatgttaatgtgaaagccaagctttgttttgaacggttcttggtttctgatatg
aatcaatttggtggtggtttgcttcctgaaaatgtccattctcttcaccttgttgatctt
ccagggcgttatgtgttacaggttgatgagattgtcaacataagctgtccattaaaaagt
aggtatcagaaagcagctcccgggatcaagagatgtcttaagttgtcaatgacagatggc
gttcaacgtgtgtttggcatggaatacagaccaattaaggatcttgatgctttgtctccg
gctggattgaaggttgtcatatgtaatgtgcatgtacggcatggacttcttatgctggtc
cctgaaaccttcgaagttctagggggactagttcaggagatggaggaagcacgacagcgg
cttgtagatgaagttaataagccgccaagaggaataagaaccaggaacagagaacttcct
cctttgaggactcgagcaactcttgctgcatggtcatcgagcaatgatcatgttcctggg
aacaaccataacacaacatctgatttcagaacccccttacaggtgcatcaagctgctgct
actcatgttgcgccgagtactaataccaatcaaaggatggaggaagacatccctggacgt
gttaatgaagaaaattataatcccaacccatcagctaatgttcatgatgtggaagagtct
cctgatacttatgttgcacctggtaatgttgctggtcaaaggaataaggaggagctctct
ggtcgtgttagtggagaaaattttagtcgcaatccatcagccaatgtcacttttggcgag
gatggttctcctgctcctgccagtgccgaaagtgttatttctaaagcaccccgcagtgtt
gttgcaggtatagaacacctccatatgaattctataggccctaacagcgcaagtggttcg
cgccccaccggccaatcttctgatgtcgcttcagttatggatgaaacagatacagataca
gttccccctacaacgagatatccagtgtctgatccatatttaaatgacaatgaggatact
attatggttgacttggttcaacatccactcattctatcaggagcccgggaaccccctttc
acttacttatctagtttgtcagccaagttggctgcaatgacaggaagggttcattctgtt
aagggtatgattaagtgctttttaaccggtgtaaaaggattccagtacagggagaaagcc
acctatgatcttcgggtgtttgttgatgatggtagtttaatcaaagagattcgaatacat
cataatcttgtacagaaattgataggccattctccacgagaggtaatggcagctcttgct
tctccagacacaggaatagttaacaacatcaaggaaactctgcgtaatttccaaaacttc
ttagctagttttgaggggaaaatgcttatagagatgcatgatcaccatgaacatccagtt
gctgtagagatgaatgtgggctgtcccgaatctgatgcattgttacttttgagaagagtg
aagtcctcattttcatctcctcaaacaaggtctcttcctgtggatcccattgatctatcc
ccttaa
DBGET
integrated database retrieval system
