KEGG   Cannabis sativa (hemp): 115708755
Entry
115708755         CDS       T08987                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115708755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115708755
   03400 DNA repair and recombination proteins [BR:csav03400]
    115708755
Spliceosome [BR:csav03041]
 Complex B
  Other components
   Prp19 complex
    115708755
 Complex C
   Prp19-CDC5 complex
    115708755
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115708755
SSDB
Motif
Pfam: BCAS2 Crescentin YjbH DUF7801 Exonuc_VII_L FUSC PUMA_CC
Other DBs
NCBI-GeneID: 115708755
NCBI-ProteinID: XP_030492622
UniProt: A0A803R1C8
LinkDB
Position
3:3980351..3983923
AA seq 253 aa
MAITNSSEEILMLEAPPSGPLWHVPANAEIVDALPYIDDDYADPTVKRDVDRLVEEEMRR
SSKKPSDFLKDLPPLPKSNFQDHPMLAREYERVRAAKPPVILDFSRDKLEIPVANKRNDE
TAWKQALQKAQCSLQHQTIRLENLDLTFKYGSEAWKQHNRRLEVLLSRLQKLAQQQYDKI
ETVNRERKYHQQNTAYELNALSAQWKELCHKNIEIQAACGQLENHISDLKREASERGWSL
ETSAEVSSIQNLE
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgatcaccaacagctctgaagaaatccttatgcttgaagctcctccctccggacct
ttatggcatgtaccagcaaacgccgaaatcgtcgacgctttaccctacatcgacgacgat
tacgccgacccaaccgttaagagagacgtcgatcgattagtggaggaagaaatgcgaaga
agttccaagaagccttccgatttcctcaaggacttacctcctctccctaaatccaatttc
caggatcatccaatgctcgctagagagtacgaacgtgttcgagctgcgaagcctccggtg
attcttgatttttctcgtgataagttggagattcctgtggctaataaaaggaacgatgaa
actgcttggaaacaagctcttcagaaagctcagtgttctttgcagcaccaaactattagg
ttggaaaatttggacttgacttttaagtatggttctgaggcttggaagcagcacaatcga
cggttggaagtgctcttgtcaagactgcaaaagttagcacaacaacaatatgacaagatt
gagacagtaaaccgtgaaaggaaatatcatcagcaaaacactgcttatgagcttaatgct
ctctctgctcagtggaaagagctttgtcacaagaatatcgaaattcaagctgcatgtggt
caacttgaaaatcacatatctgatttaaaaagagaagcttcagaaagaggatggagtttg
gagacaagtgcagaggttagttctattcagaacttggaatga

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