Cannabis sativa (hemp): 115708809
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Entry
115708809 CDS
T08987
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115708809
04121 Ubiquitin system [BR:
csav04121
]
115708809
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115708809
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115708809
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115708809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Zn_ribbon_RPAB4
zf-RING_5
zf-C3HC4_3
zf-RING_16
DZR
zf-HC5HC2H
Prok-RING_4
VPS18_RING_C
Prok-RING_1
Zf_IFT144_1st
HypA
zf-Nse
Motif
Other DBs
NCBI-GeneID:
115708809
NCBI-ProteinID:
XP_030492701
LinkDB
All DBs
Position
X:46271592..46275745
Genome browser
AA seq
389 aa
AA seq
DB search
MSSSGGFSAGGGGANAPQLYFCHQCNRTVSLDPSSEIVCTECGGGFLEEVENPMPSPNFN
PFFSFSPDAPSFSASGFPIMFSAGSASGPGGGRSGGAGGTIVDDLSALLGGAPTQGSQFH
DPEAFNPFLFLQNYLQTLRANGANVQFVIDGNPGDSTGFRVPTNLNLGDYFFGPGLEQLI
QQLAENDPNRYGTPPASKSAVEALPNIKITEEMLASDNSQCAVCKDTFELGEEAKQIPCK
HIYHSDCILPWLELHNSCPVCRYELPTDDPEYEQRTQAASAPVNQNQTPGIFNTPTMGGS
TNAAAAAAAGEDSGIGASTGENPTTPRSVERRFTINLPRVFRLFGSNAETSNPGNDNNNN
NEGTNDGSNSGNRGNQNTGSSEPRHEDLD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtcgggcggcttctctgcaggtggtggtggtgccaatgcaccccaactttat
ttttgccatcaatgcaatcgcacagtaagcctagacccctcttcggaaatagtttgtact
gaatgcggtggtggcttccttgaagaagttgaaaaccctatgcccagtccaaactttaat
ccctttttctccttttcacccgatgcaccatcctttagtgctagtggctttcccattatg
ttctccgcaggatctgcctctggtcctggtggtggtcgtagtggtggtgctggtggtacc
atcgttgacgatctctcagccctcttgggtggtgcgccaacacaaggttctcagtttcat
gatcccgaagctttcaacccatttttgtttcttcaaaactacctacaaacactaagagcc
aatggtgccaatgttcagtttgtgattgatggcaaccctggggactcaactggtttccgt
gtcccgaccaatcttaatctcggtgactactttttcggccctgggcttgaacaattgatc
cagcaacttgcagaaaacgaccccaatcgttacgggacacctccagcatcaaaatctgca
gtggaagcactccccaatataaagattacagaagaaatgttggcttcagacaattcacaa
tgtgctgtgtgcaaggatacattcgagctcggtgaagaggcaaaacaaataccctgcaaa
cacatttatcattcagattgcattctcccatggttggagttgcataactcttgccctgtt
tgtcgttacgagttgcccactgacgaccccgaatacgaacagaggactcaagcagcctct
gcccccgtgaatcaaaatcaaacacctgggatattcaatacccccaccatgggggggagc
accaatgctgctgctgctgctgctgcaggcgaagacagtggaatcggtgcatcgactgga
gaaaatcctacaacaccacgctcagtagagcgcagatttacgatcaatttgccaagggtt
tttagactctttggctcgaacgctgaaacaagtaaccctggcaacgacaacaacaacaac
aacgaaggaaccaatgacggatcaaactcgggaaaccgaggaaaccagaacactggatca
tcagagcctagacacgaagatctcgattaa
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