Cannabis sativa (hemp): 115708975
Help
Entry
115708975 CDS
T08987
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115708975
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115708975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
AvrPiz-t
Motif
Other DBs
NCBI-GeneID:
115708975
NCBI-ProteinID:
XP_030492854
LinkDB
All DBs
Position
3:complement(1952220..1956491)
Genome browser
AA seq
436 aa
AA seq
DB search
MNNKNNIPKLHFLLLFLLSFITFNGSFSFSFNPNRENGNTHGLMTRFSRTTRSSSSPSPS
SSSPQIFNVDDFGARSDRYDDSQAFYKAWKRACSSKNGVVLVPKNKVYYLKPITFSGPCK
SSQITIRISGTIKASPRRSDYQKDTRYWIVFNNVENLRVEGGGTINGNGRKWWINSCKIN
KALPCIHAPTAVTFYDCKNLKVRNLRSKNAQQMHINFQKCVNVEAMNLRVIAPGNSPNTD
GIHITDTQDIQIMNSVIRTGDDCISIVSGSKNVRATDITCGPGHGISIGSLGAGNSEAEV
SNVMVNRARISGTTNGVRIKTWQGGSGYAKNIIFQNIEMINVTNPIIIDQNYCDQDEPCH
EKRSAVKISDVVYNNIRGTSDSEVAVKFECSKSNPCEGISLTNVNLVREGEGVVEASCQN
VNFDKSGRVFPRCSNT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataataagaataacattccaaaacttcattttcttcttttatttttactatctttc
ataactttcaatggctcattttccttctcttttaaccctaaccgcgaaaatggtaacaca
catggtctgatgactaggtttagccgaacaactaggtcatcatcatcgccttctccttcg
tcttcctcacctcaaatattcaatgtcgacgattttggtgctaggagtgaccgctacgac
gatagtcaggcattttacaaggcatggaaacgggcttgttcatcgaaaaacggcgtagtt
ttggtacctaaaaacaaagtttattaccttaaaccaatcacattttctggtccttgcaaa
tcttctcaaataactattaggatatctggaacaattaaagcttcacctagaagatcagat
taccaaaaggacacaagatattggattgtgtttaataatgtggaaaatttaagagttgaa
ggtggtggaactatcaatggcaatggtagaaaatggtggattaactcttgcaaaatcaac
aaagctcttccttgtattcatgctccaactgctgtgacattttatgattgcaaaaatctg
aaagtgaggaatttgaggtctaaaaatgcacaacaaatgcatataaattttcaaaaatgt
gtgaatgttgaagctatgaatttgagagtaattgcacctggaaatagtcccaatactgat
ggaattcatatcactgatacacaagatattcagattatgaactctgttatcagaacaggt
gatgactgcatttcaattgtaagtgggtcaaaaaatgttagagccacagatattacttgt
gggcctggtcatggcataagcattggaagcttaggagctggaaattcagaagctgaagtc
tctaatgtgatggtgaatagagcaagaatttcaggcactactaatggagtaagaattaaa
acttggcagggaggatctggttatgcaaaaaacatcatattccaaaatatagaaatgatc
aatgtgaccaacccaataatcatcgatcaaaattattgtgatcaagatgaaccttgtcat
gaaaagaggtcagctgtcaagataagcgatgtagtgtacaacaacataagaggaacgagt
gattctgaagtggcagtaaaattcgagtgtagcaagagtaatccatgcgaaggaatttca
ctcacaaatgttaatttggtgcgcgaaggagaaggtgttgttgaagcctcgtgtcaaaat
gttaactttgacaaaagtggaagagttttccctagatgttccaacacttaa
DBGET
integrated database retrieval system
