Cannabis sativa (hemp): 115709043
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Entry
115709043 CDS
T08987
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115709043
Membrane trafficking [BR:
csav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
115709043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
115709043
NCBI-ProteinID:
XP_030492933
LinkDB
All DBs
Position
3:complement(55667592..55693802)
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AA seq
802 aa
AA seq
DB search
MDSVVPTLPPPSNLSSYIVSFLNDNLHTRETLTLAPNLLSQLQSNCSDLDQSIIDLNRSL
GATLVAYASFSDQIHGLLSDINGQLIDLGSFTRSHGYVEPDGESGEGKGRTEKILGEELP
ALAKEVARVETVRLYAETALKLDSLIGDIEDAVSSTMTKNLKKYYATQDSEDTRLRAIKT
LKLTEDILTSVTKRQPQWGRLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPSLSSL
TSAAPNKAKILNPLFTMQGDLKHQYCENFFALCSLQELQRRRKSRQLEGYSREVAIYQPL
WVIEELVNPMFLASQRHLSNWVEKPEFIFALVYKMTRDYVDSMDELLQPLVDEAMLSGYS
CREEWISANVSSLSTYLAKEIFPKYDAQVDEENDMDTQSQARTSWLHLIDLMISFDKQIK
SLLEHSGVSFSFQEDESMQKISSFSVFSDRPDWLDLWAKIELGEILNKLKNDCEDEKNWT
IKVQGANLSSNPDDYNAPPITSAFIRHLSAIINRCRSLPKKSLRSRFLRSAGAPILIKFL
DCLLFRCQEAEGLTALTNDEALIKVATSINAARKLESVLREWCEDLFFLELGSIHRDQAE
ENESGKGLIEDLENGIFDVETEKLEALRMEWVEKLYVVILRGFDALCRDYMKNKRQWQEK
SEEGWTVSKSLVGALDYLQGKMSVLEVNLNRKDFIGVWRSLASGIDRMIFNGILLSSVKF
YDGGVERFGSDLEVLFGVFRSWCMRPEGFFPKLSEGFKVLKMSEKQLKNDFVGSEKWLED
NRIRHLSVVEVDRIMKNRVFGS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggactcggttgtcccaactctgcctccaccctccaatctctcttcctatatcgtatcc
ttcttaaacgacaatcttcacaccagagaaactctgactttagctcccaatctcctttca
cagctccaatctaactgctccgatttggatcaaagcataattgacctcaatcggagcctc
ggagccaccttggttgcttacgcttccttctccgatcaaattcatggcctcttgagtgac
attaatggccaattgatcgatcttggatctttcactcgctctcatggatatgtcgagcca
gatggggagagtggagagggaaaagggagaacggagaagatattgggggaggagttgccg
gcattggcgaaggaagtggcgagagtcgagactgttcggctgtatgctgaaacagcattg
aagcttgatagtctgattggtgacattgaggatgctgtatcttcaactatgacaaaaaac
ttaaagaagtattatgcaacacaagactcagaagatactcgtttacgtgctatcaaaact
ctgaaactgactgaagacattttaacttcagtcactaaaagacagcctcaatgggggcgt
cttgtttcagcagtcgaccacagagtagatcgagcattggccatcttaagaccacaggca
attgcagatcatcgagcacttctagcttcccttgggtggccaccttcactatcatctttg
acttcggcagccccaaacaaagccaaaatcctcaatcctctttttacaatgcaaggggac
ctcaaacaccagtactgtgaaaacttttttgctctgtgcagtctacaggagcttcagcga
cgaagaaaatctcggcaactggaaggctatagtagggaagttgctatatatcagccactt
tgggtgattgaggagctggtaaatccaatgttcttggcatctcaacgacatctctcaaac
tgggttgagaagccagaattcatttttgccctagtctataaaatgactagagattatgta
gactctatggatgaattattacaaccactggttgatgaagctatgctatccgggtatagt
tgcagagaagaatggatttcagctaatgtatcttccttatcaacttacttggctaaagaa
attttcccaaagtatgatgcacaggttgatgaagagaatgatatggatacccaatcacag
gctagaacatcctggcttcatcttattgacttaatgatatcatttgataaacagattaag
tctctgttagagcattctggagtctctttttccttccaggaagatgagagcatgcagaag
atttcttcattctctgtttttagtgatcggcctgactggcttgacctttgggcaaagata
gagctgggagaaatactaaataaattgaaaaatgattgtgaggacgagaaaaattggaca
ataaaggttcagggagcaaacctttcatctaaccctgacgattataatgctcctccaatt
actagtgcttttatacggcacttatcagctataattaaccgttgtcgatcacttcctaag
aaatccctcaggtcaaggtttctcagatcagctggtgcccctatcttaataaagtttttg
gattgcttgcttttcaggtgccaagaagctgaaggtttgactgcattgactaatgatgaa
gccttaatcaaagtggcaacatctattaatgctgctcgtaaactggaatctgtactaagg
gaatggtgcgaggacctgttttttctggaattgggatcaattcatcgtgatcaagctgag
gagaacgagagtggcaaagggctgattgaagatcttgaaaatggtatatttgatgtggag
actgaaaagttggaggcattaagaatggagtgggttgaaaaactatatgttgtaattttg
aggggttttgatgctctatgtcgagattatatgaagaacaagaggcagtggcaggaaaaa
agtgaggaaggttggaccgtttcaaagtctttagttggggcacttgattatctgcaaggg
aaaatgtcagtgctagaagtcaatttgaacaggaaagacttcattggggtgtggagaagt
ctggcttctgggattgatagaatgatattcaatggtattcttttgagcagcgtgaagttt
tatgatggtggagttgagagattcggtagtgatttagaggttttgtttggtgtgtttagg
tcttggtgtatgaggccagaaggcttctttccaaaactaagtgaggggttcaaagtgttg
aagatgtcagaaaaacaacttaaaaatgattttgttggatcggagaaatggttggaagat
aacagaattcgacatttgagtgtagttgaggtagatagaatcatgaagaacagagtattt
ggtagttga
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