KEGG   Cannabis sativa (hemp): 115709200
Entry
115709200         CDS       T08987                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03030  DNA replication
csav03410  Base excision repair
csav03420  Nucleotide excision repair
csav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115709200
   03410 Base excision repair
    115709200
   03420 Nucleotide excision repair
    115709200
   03430 Mismatch repair
    115709200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csav03032]
    115709200
   03036 Chromosome and associated proteins [BR:csav03036]
    115709200
   03400 DNA repair and recombination proteins [BR:csav03400]
    115709200
DNA replication proteins [BR:csav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115709200
  DNA Replication Termination Factors
   ELG1-RFC complex
    115709200
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115709200
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115709200
  Check point factors
   HRAD17(Rad24)-RFC complex
    115709200
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 RuvB_N RCF1-5-like_lid nSTAND3 AAA_11 AAA_24 AAA_28 AAA_19 AAA_5 AAA_assoc_2 DNAX_ATPase_lid AAA_25 ABC_tran AAA_30 AAA_18 RNA_helicase MeaB IstB_IS21 NTPase_1 KTI12 AAA_3 bpMoxR T2SSE DO-GTPase1 SLFN-g3_helicase AAA_7 AAA_29
Other DBs
NCBI-GeneID: 115709200
NCBI-ProteinID: XP_030493145
LinkDB
Position
Unknown
AA seq 332 aa
MASSSSSSLSNYDIPWVEKYRPNKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPPGTGK
TTSILALAHELLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRL
MVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPHPLH
VKNIVRNVLEGKFDDACFGLKQLYDLGYSPTDIITTIFRIIKNYDMAEYLKLEFMKESGF
AHMRICDGVGSYLQLSGLLAKLSMARETARAP
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcttcttcttcgtcttcttcattgagcaactacgatattccatgggtagagaaatac
agacccaacaaggttgtggacattgtcggcaatgaagatgctgtctctaggcttcaggtc
attgctcgcgatggaaatatgcccaacatcatattatcaggtcctcctggaactggtaaa
accactagtatacttgctctagcacatgaactgttgggaccaaattatagagagggcgta
ctagagctaaatgcttcagatgatagaggcatagatgttgtgaggaacaaaattaaaatg
tttgcacagaaaaaagtaacacttcctcctgggcggcacaaggtagttatattggatgaa
gctgacagcatgacatctggagcacaacaagctttgaggcggacaatggaaatttattct
aactccacccgatttgctcttgcgtgcaatacttcttccaaaattattgagccgattcag
agtagatgtgcccttgttcggttttcaagattatctgatcaacagatacttggtcgtctg
atggtggttgttgaagcagaaaaggttccttatgttccggaaggtcttgaagccattatt
ttcactgctgatggtgacatgaggcaggcactgaataacttgcaagcaacacacagcggt
ttccggtttgtcaaccaagaaaatgttttcaaggtttgtgaccagccacatccattgcat
gtgaagaatattgtgcgtaatgttcttgaagggaaatttgatgatgcctgctttggtctc
aagcagttatatgatctgggttattctcccactgacattatcactacgatttttcgtatc
attaagaactatgatatggctgagtatttaaaattggaattcatgaaggaaagcgggttc
gctcatatgagaatctgcgatggagttggttcatatcttcagttaagtggtcttcttgca
aagctttctatggctcgtgaaacagcaagagctccttag

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