Cannabis sativa (hemp): 115709396
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Entry
115709396 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115709396
KO
K24741
WD repeat-containing protein 20
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csav04990
]
115709396
Domain-containing proteins not elsewhere classified [BR:
csav04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115709396
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_Nup120_160
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_DCAF12
PP2C_2
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
115709396
NCBI-ProteinID:
XP_030493347
UniProt:
A0A803P5E4
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Position
3:22878362..22882757
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AA seq
545 aa
AA seq
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MINTANGMMSTASSSGNAQSPGLKTYFKTPEGRYKLHYEKTHPSGFLHYTHGKTVTQVTL
AYLKDKPSPSTPTSSQSSFTTSGGVRSAAARLLGGGNGSRALSFVGGNGGSKSVSASRVG
SLGASSSTNLASTSNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPICHAFD
QDARDGHDLIIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNSSRCTSIAWVPGG
DGAFVVAHADGNLYVYEKNKDGAGDSSFPVIKDQTQFSVSHARYNKSNPIARWHICQGSI
NSITFSTDGTYLATVGRDGYLRVFDYSKEQLVCGGKSYYGALLCCAWSMDGKYILTGGED
DLVQVWSVEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSDGTEETVYRFGSVGQDTQLLLW
DLEMDEIVVPLRRPPGGSPTFSTGSQSSHWDTVCPIGTLQPAPSMRDVPKISPLVAHRVH
TEPLSGLTFTQESVLTVCREGHIKVWMRPGAADNQSSNGETVLSTSLKEKPLLSSSKAGN
SSYKQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacactgccaacggtatgatgtcaacggcttcttcatcggggaacgcccaatcg
cctggtctgaagacctatttcaaaacaccagaaggtcgatataagcttcattacgaaaag
actcacccttcgggttttctccactacacccatgggaaaaccgtcacccaggtgactcta
gcatatctcaaagataaaccttccccatcaacccctacatcctcacaatcaagcttcact
accagtggaggtgtgagatcagctgcagctaggttgctaggtggtggaaatgggagtcgg
gcacttagctttgttggcggcaatggtgggagtaagagtgtcagtgcaagtagagttggg
tcattgggggcttcaagctctaccaatttggcctctacatcaaattttgatggcaaaggg
acttatttgatctttaatgtgggggatgcaatttttataagcgacttgaattcccaagac
aaggatccaataaaatcaatacattttagtaattcaaaccccatttgtcacgcatttgac
caagacgcaagggatggtcatgatttgattattgggctgaattcaggagatgtatattct
gtctcactgagacaacaattacaagatgttggaaagaagcttgttggggcccaacactat
aacaaagatggttcggttaatagcagccgctgtactagtattgcatgggtgcctggcggt
gatggtgcttttgtagttgctcatgctgatgggaacttgtatgtgtatgagaagaacaaa
gatggtgcaggtgattcttcattccctgtcatcaaagatcaaactcaattttctgtttcg
catgctcgctataataagagtaacccaattgccagatggcatatatgccaaggttccatt
aatagcatcactttctctactgatggaacatacttagcaactgttggaagagatggttat
ttacgtgtttttgactactctaaagagcaacttgtatgtggtggcaaaagttattatggt
gcgctcttatgttgtgcttggagcatggatggaaaatacattctgactggaggagaagat
gatttagttcaggtttggagtgtggaagatcggaaggttgtagcatggggtgaggggcat
aattcatgggtcagtggagtggcttttgattcatactggtcatcaccaaattcagatggt
acagaagagactgtataccggtttggttctgttggccaggacacacagttgctcctttgg
gacctagaaatggatgagattgttgtaccattgcgacgaccacctggtggatccccaact
tttagcactggaagccagtcatcccattgggacactgtttgtccaattggcactcttcaa
cctgctccgagcatgagagatgtcccaaagatctcaccactggttgcacatcgtgtgcat
accgaacccctttctggtttgacttttacacaagaatctgttcttactgtctgccgagag
ggacatattaaagtttggatgagaccaggagctgcggataaccaatcgagcaacggtgaa
actgtcttgagtaccagcttgaaggagaaacctttattgtcatcaagtaaggctggcaat
tcaagttacaagcaatga
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