Cannabis sativa (hemp): 115709412
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Entry
115709412 CDS
T08987
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115709412
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115709412
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115709412
NCBI-ProteinID:
XP_030493370
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Position
3:45075812..45078172
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AA seq
407 aa
AA seq
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MALLTHIVFFFFTFLTSTLLSSSSPVPDPELVVEEVHKSIINATRARRNLGYLSCGTGNP
IDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGRIYVVTDSSDNDVVNPKPGTLRYGV
IQDEPLWIIFARDMVIKLKEELIMNSFKTLDGRGASVHIAGGPCITVQFVTNIIIHGLNI
HDCKPGGNAMVRDSPHHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCQDGLIDAIHGSTA
ITLSNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSANPTINSQGNRFLAPNNRFSKEVTKHEDAPESEWKNWNWRSEGDLMVN
GAFFTASGAGASSSYAKASSLGARPSSLVGTITTNAGSLICRKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcattactcactcacattgtcttcttcttcttcactttcctaacctcaactcttctc
agctcctcttcaccagtaccagacccagaacttgtagtagaagaagtccacaagagtatt
attaatgccactcgagcacgaaggaacttgggttacctatcttgcggaacgggtaacccg
atcgacgattgctggagatgcgatccgaattgggagaagaaccgacagagattagcagat
tgcgcaatcggtttcggtaaaaatgcgatcggaggaagagacggaaggatttacgtcgtt
actgattctagcgataacgatgttgtgaacccaaagccaggaacactccgttacggcgtg
atccaagacgagccgttatggataatcttcgctagagatatggtgattaagcttaaagag
gaattaatcatgaactctttcaagacattagacggtcgaggagccagcgtccacattgcc
ggtggaccttgtataacggttcagttcgtgacgaacattattatccacggtttgaatatt
catgactgtaaaccaggtggtaatgctatggtgagagactccccacaccattttgggtgg
agaactatatctgacggtgatggtgtgtcgatctttggtggaagccacgtgtgggttgat
cattgctccttgtctaactgccaagatggtttaatcgatgcaattcatgggtccactgct
ataacactctcgaataattacatgacgcaccatgataaggttatgttgttgggtcatagc
gattcttatactcaagacaagaacatgcaagtcactattgcttttaaccattttggtgaa
ggccttgttcaaagaatgccaagatgtaggcatggttatttccacgtggtgaacaatgac
tacacccattgggagatgtatgccattggaggaagtgcaaaccctactattaatagtcaa
ggaaatagatttcttgctccaaataacagattcagtaaagaggtgactaaacatgaggat
gcaccagaaagtgagtggaagaattggaattggagatcagaaggagatttaatggtaaac
ggtgcgtttttcacagcctcaggagctggagcttcttcgagttatgctaaggcatctagc
ttgggagctagaccatcttcacttgttggtactattaccactaatgcgggttcacttatt
tgccgtaagggctctcgttgctga
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