Cannabis sativa (hemp): 115709438
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Entry
115709438 CDS
T08987
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115709438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csav02000
]
115709438
04147 Exosome [BR:
csav04147
]
115709438
04090 CD molecules [BR:
csav04090
]
115709438
Enzymes [BR:
csav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115709438
Transporters [BR:
csav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115709438
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115709438
CD molecules [BR:
csav04090
]
Proteins
115709438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
nSTAND1
AAA_5
AAA_30
AAA_25
APS_kinase
AAA_15
DUF87
Rad17
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
115709438
NCBI-ProteinID:
XP_030493406
LinkDB
All DBs
Position
3:19652194..19659152
Genome browser
AA seq
1393 aa
AA seq
DB search
MSQDSQEIKTIEQWRWSEMQGLELVSASPSPTFEPFKGNPSTQTAMALAMASSQTTTTKE
PVRLDDEEEGKREPQLGLDTASKTEEEAMENSNDNNGEQSKKDSNGGGGSSSGGSGSSGE
KPEPYPAAGFGELFRFADSLDYVLMTIGSLGAIVHGCSLPLFLRFFADLVNSFGSNANDT
DKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIKYLEAALNQDIQYFD
TEVRTSDVVFAINTDAVMVQDAISEKLGNFVHYMATFVSGFVVGFTAVWQLALVTLAVVP
LIAVIGGIHTTTLAKLSGKSQESMSEAGNVVEQTIVQIRVVMAYVGESRALQAYSNALRI
AQKLGYKSGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGL
ALGQSAPSMGAFAKAKVAAAKIFRVIDHKPSIDRNSDSGLELESVTGLVELRNVDFSYPA
RPDVRILNNFCLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKL
RWLRQQIGLVSQEPALFATTIKENILLGRPDADLVEIEEAARVANAHSFIIKLPDGFDTQ
VGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTL
VIAHRLSTIRKADLVAVLHQGSVSEIGTHDELIAKGENGMYAKLIKMQEAAHETALNNAR
KSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAPYPNYRLEKLPFK
EQASSFWRLAKMNSPEWVYALVGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHAFMIKQI
GKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENESG
RVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAAT
VLQKMFMTGFSGDLEAAHSKATQLAGEAIANVRTVAAFNSEGKIVGLFTTNLEAPLRRCF
WKGQIAGSGFGIAQFALYASYALGLWYASWLVKHEISDFSKTIRVFMVLMVSANGAAETL
TLAPDFIKGGRAMRSVFELLDRKTEIEPDDPDATPAPDRLRGEVELKHVDFSYPSRPDIP
VFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRK
HIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAATMANAHKFVSSLPDGYKTFVGERG
VQLSGGQKQRIAIARALLRKPELMLLDEATSALDAESERSVQEALERACSGRTTIVVAHR
LSTIRNANVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMASAGSTS
SAKPKEDEEREAK
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctcaggagataaagacgattgagcagtggagatggtccgaaatgcaa
ggtttggagctcgtgtctgcttctcctagtcctacttttgagccatttaaaggcaaccca
tcaacgcaaacggcaatggctttagctatggcttcttctcaaaccacaacaactaaagag
ccagtcagacttgatgatgaggaagaaggaaaacgagaaccccaactgggtctcgacaca
gcttccaaaacagaagaagaagcaatggagaatagcaacgacaataacggtgaacagtct
aagaaagattctaatggcggtggcggtagtagtagtggtggtagtggcagtagtggggag
aagcctgagccttatccggcagctgggttcggtgaactttttcgattcgctgatagtttg
gattatgttctgatgacaattgggtcgcttggagctatcgtccatggctgctctttgcct
ctctttcttcgattctttgccgatcttgttaattcctttggctccaatgccaatgacacg
gacaagatgatgcaagaggttctaaagtatgcattatattttctagtcgttggagctgca
atatgggcatcttcgtgggctgagatatcttgttggatgtggactggagaaagacaatca
accaggatgagaattaagtaccttgaagctgctttgaaccaagatattcaatacttcgat
actgaagttcgaacatcagacgttgttttcgccataaacactgatgctgttatggtccaa
gatgccattagtgaaaagttgggaaattttgttcactatatggccacatttgtatctggt
tttgtggttggtttcactgctgtgtggcaattagctttagtgactcttgcagttgttcct
ctcatagctgttattggaggtatccacactactacattagccaaactctctgggaagagc
caggagtctatgtcagaagctggaaatgttgttgagcagacaatagttcaaattcgggtg
gtgatggcttatgttggagaatcaagagcattacaagcgtattccaacgcattgagaatt
gctcaaaagctcggttacaagagcgggttggcaaagggaatgggacttggggcaacatac
tttgtagttttttgctgttatgcacttctgctatggtacggtggttatcttgttaggcat
cactataccaatggaggactcgccatagccaccatgtttgctgtcatgatcggtggactg
gccttaggtcagtctgcacctagcatgggtgcatttgcaaaggctaaagttgcagctgct
aaaatttttcgtgtaattgatcacaagccaagcattgaccgcaacagcgactcagggttg
gaactagagtcagttacaggactagttgaactaagaaacgtggacttctcctaccctgca
aggcccgatgttcgcattttaaacaacttctgcctaaatgttccagccggaaagactatt
gctttagttggaagcagtggctctggcaagagcacagtggtctcccttattgagagattc
tatgaccctacctcagggcaagttatgcttgatgggcatgacataaagacactaaaactc
aggtggctgagacaacaaattggacttgtgagccaagaacctgctctatttgctacaacc
attaaagaaaacatactgttgggtaggcctgatgctgatctagttgaaattgaagaagct
gctagagttgcaaatgctcattcattcattatcaaacttcccgatggctttgatactcag
gtaggggaaagaggtttgcagctctctggaggacagaaacagaggatagctatagcaagg
gccatgctaaaaaacccagcaatcttattgttagatgaggcaacaagtgcattagattct
gaatcagagaagctggttcaagaggccctagatcggtttatgattgggaggacaactctt
gtcattgctcatcgcctatcaaccattcgcaaggctgaccttgtagctgtactgcaccag
gggtctgtttctgaaattggaacccatgatgaactcattgctaaaggagagaatggtatg
tacgcgaagctcatcaaaatgcaggaggcagcacatgaaactgctctcaacaatgccaga
aagagtagtgcaagaccttctagtgccaggaactcagtaagctcaccaataattgctcga
aattcctcgtatggtcgttcaccctattcacgccggctgtctgacttctcaacttctgat
ttcagtctttcccttgatgccccatatccaaattaccggcttgaaaagcttccttttaag
gagcaagctagctctttctggcgtcttgcaaaaatgaattctccagaatgggtttatgct
ttagtcggttcaattggttctattgtgtgtggatcacttagtgctttctttgcatatgtt
ctgagtgctgttctcagtgtctactacaatccagaccacgctttcatgattaaacaaatt
ggtaagtattgttatctgttgattggactttcttcagctgcacttctcttcaacacacta
caacatttcttctgggatattgtgggcgaaaacttgacaaaacgtgtgagggagaaaatg
ctggcagcagtgctgaaaaatgaaatggcatggtttgaccaggaggaaaatgaaagtggt
agggtagctgcaaggctggctcttgatgctaacaatgtcagatcagccattggagacagg
atatcagtaattgtacagaacacggcactcatgttagttgcctgcacagccggatttgtt
ctgcagtggcgtcttgcccttgtccttgtagccgtcttccctgtcgttgttgctgccact
gtcttacagaaaatgttcatgactggtttctctggagaccttgaagctgcacattccaag
gccacccaactagctggggaggccatagccaatgtaagaactgtagctgccttcaattca
gagggaaaaatagttggtctattcacaaccaaccttgaggctccattacgacgctgcttt
tggaagggtcagattgctggaagtggatttgggatagctcagtttgcactttatgcctct
tatgcccttggtctttggtatgcttcgtggcttgttaaacatgagatctctgatttctcg
aaaactatcagagttttcatggtccttatggtctctgccaatggagcagctgaaacattg
accttagctcctgacttcatcaaaggtggccgagctatgcgctcagtatttgaacttctt
gaccgtaaaactgaaatagaacctgatgatccagatgccacaccagctcctgatcggctg
cgtggtgaagttgaattaaagcatgtagacttctcttacccttctcgccctgatatccct
gtcttccgtgacttaagtcttcgtgctcgagcaggcaaaactcttgcacttgttggtcct
agtggatgtggaaagagctcggttattgcattggtacaacggttctacgacccaacatca
ggccgggttatgattgatggcaaagacattagaaaatacaatctcaagtccctcagaaag
cacatagctgtagtgccgcaggagccatgccttttcgctacaactatatatgagaacata
gcttatggtcatgagtcagcaactgaggctgaaatcatagaagctgcaactatggccaat
gctcacaaatttgtatcttcattgcctgatggatacaaaacatttgttggggaaagagga
gtccagttatccgggggtcaaaaacaaagaatcgcaatcgctcgagcattattgaggaag
ccagagcttatgctgcttgacgaggcaactagtgcactcgatgctgagtctgaaagatct
gttcaagaggctttagagcgtgcctgctccggaagaactacaattgttgtagcacacaga
ctttccactatccgaaatgccaatgttattgcagtaatcgacgatgggaaagtagcggag
caaggatcccactcccatttgttaaaaaattaccctgatgggtgttatgcaagaatgatc
cagttacaaaggttcacacacagccaggttattggtatggcatcagcaggctcaacttct
tcagcaaaacccaaagaagatgaggaaagagaagccaagtaa
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integrated database retrieval system
