Cannabis sativa (hemp): 115709631
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Entry
115709631 CDS
T08987
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115709631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115709631
Ion channels [BR:
csav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115709631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115709631
NCBI-ProteinID:
XP_030493640
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All DBs
Position
3:complement(49847217..49851349)
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AA seq
710 aa
AA seq
DB search
MLSSRPYTATAAATVISSSSSKFRHFVRPPLQPLSTLRKKIPWWNQILDPGSEVVAKWNH
VFLVTCLIAMFIDPLYFYLPVIGGPVCMEIDLGLGILVTFFRTVADTFYFLHIVMKFRTA
FVAPSSRVFGRGELVTDPWAIAVRYLKSDFFIDLAASLPLPQIMIWFVIPAVKNPTAAHA
NHTLSLIVLVQYVPRFFLIFPLNQRIIKTTGAIAKTAWAGAAYNLLLYNLASHVVGACWY
VLSIQRQYQCWKQECDKEINFTHSPSCQPKFLDCKNMGDPERRFWLQRTQVLSSCDALND
ANNFEFGMFADAFTSEIASSHFIEKYFYCLWWGLRSLSSYGQNIVASYAINGEILFSLLI
CSAGLVLFSHLIGNMQSYLQSTTARLEEWRVRRRDTEEWMRHRQLPLELQDRVRRFVQYK
WIATRGVDEESILHDLPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNT
KDTYIVREGDPVNEMLFIIRGHLESSTTDGGRSGFFNSIALRSGDFCGEELLTWALMPTS
SLNLPCSTRTVRSITEVEAFALRAEDLKFVASQFRRLHSKRLQQAFRYYSQQWRTWAACY
VQVAWRRWWKRKMAHELTRQEELYQYYYSDQEYCGDNNHDHDHDQSCSTMDDDTTHQRQQ
LGATVLASKFAANTRKTANISHKGVTSNLKPDAMPKKLFKPEDPDFSADL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcacgtccttacactgcgacagcggctgcaacagtcatctcgtcctcctca
tctaagttccgccactttgtaaggccacctctacagccattatcgacactgaggaaaaag
atcccttggtggaaccaaattttggaccctggttcagaggttgtggccaaatggaaccat
gtgttcctcgtgacctgcctaatcgccatgttcatcgaccctctctacttctacttgccg
gtcattggcggacccgtctgcatggagatagatttgggccttggcatcctcgtcaccttc
ttccgcaccgtagccgacaccttctatttcctccacattgtcatgaagtttcgaacagcc
ttcgtcgccccaagttctcgtgtctttggccgtggcgagctcgtcactgatccttgggcc
atcgccgttcggtacctcaagtctgacttcttcattgatctggcagcttcccttcctctc
ccccagattatgatatggtttgtaattccagcagtgaaaaatccgacagcggctcatgct
aatcacaccctatctcttattgttctcgttcaatatgttcctcggttttttcttatattt
cctctaaaccaaaggatcatcaaaacaacaggtgctatagccaagactgcttgggcaggg
gcagcatacaatctcctcctctacaatctagctagtcatgttgttggagcatgttggtac
gtattgtcgattcaaagacagtaccaatgttggaagcaagaatgtgacaaggaaataaat
ttcacacattctccttcgtgtcagcctaaatttcttgattgcaaaaatatgggcgacccc
gagcgcagattttggctgcagagaacccaagttctttctagctgtgatgcacttaacgat
gctaacaacttcgagtttggaatgtttgctgatgctttcaccagtgaaattgcttcttca
catttcatcgaaaagtatttctattgtctttggtggggtttgagaagtttaagttcatat
ggacaaaacattgtggcaagttatgcaatcaatggtgagatactatttagcctccttatt
tgctctgcgggtctagttctcttctcacatctcattggtaacatgcagtcatatttgcaa
tcaacaacggctagactggaagaatggagggtgagaagaagagatactgaagagtggatg
agacaccgtcaactgcctctagaactacaagatagagttcgtcgtttcgtacaatacaag
tggattgccacgagaggagtcgatgaagaatccattttacacgatcttcctttggatctc
aggcgtcaaatccaaagacatctctgtcttgctcttgttcgtcgtgttccattctttgcc
caaatggatgaccaactcctagatgcaatatgtgagagactagtgtcatccttgaacaca
aaagacacgtacatagtcagagagggtgaccctgtgaacgagatgctcttcattatcaga
ggtcacctagagagctccaccactgatggtggacgctctggtttcttcaactccatagca
ctcaggtcgggcgacttttgtggcgaggagcttttgacttgggctctcatgcctacttct
agcctcaaccttccttgctccactcgaactgttcggtctataacagaagttgaggctttt
gctctccgggccgaggacctcaagtttgtggctagtcagtttaggaggctgcatagcaag
aggctgcagcaggcgtttcgatactactcccagcagtggaggacttgggcggcttgttat
gtacaagtggcttggagaaggtggtggaagaggaagatggcgcatgagttgacaagacaa
gaagagttgtatcagtactattattcggaccaagaatattgtggtgataataatcatgat
catgatcatgatcagagctgttcaacgatggatgatgatactacccatcagaggcaacaa
cttggggctactgttttggcttctaagtttgctgcaaatactagaaaaactgctaatatt
tctcataaaggagtgacgtctaatcttaagcctgatgctatgcctaaaaagttatttaag
cctgaggatcctgatttttctgcggatttatga
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