Cannabis sativa (hemp): 115709701
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Entry
115709701 CDS
T08987
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115709701
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115709701
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
115709701
NCBI-ProteinID:
XP_030493732
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All DBs
Position
3:45728004..45735741
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AA seq
645 aa
AA seq
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MSPLGVKLYIEDDHVMMDNGIVQITLSNPDGIVTGIRYNGIDNLLEVRNEESNRGYWDMV
WNSPTTGITTGIFDVIKGTSLSVIVENEEQVEISFTRTWDSSMQGKFAPLNIDKRFILLR
GSSGFYTYAIYEHSKEWPGFNLGETRVAFKLRKDKFHYMAVADKRQRSMPLPDDRLPPRG
QALAYPEAVLLLNPIEPELKGEVDDKYQYSCENKDIKVHGWISKEPSVGFWLITPSHEYR
SGGPLKQNLTSHVGPTALAVFLSAHYTGDDLVPKYDEGEQWKKVFGPVFIYVNSLFDGND
RLQLWEDAKIQLMIEEQSWPYSFPASEDYPKSEQRGYVSGRLLVKDRYINSDYISANGAY
VGLAPPGEVGSWQRECKDYQFWSRADENGYFSIDYVREGDYNLYAWVPGFIGDYRYDIVL
TITSGSYVEMGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPEPNPNFVNKLYVNHPDKFRQ
YGLWERYAELYPDNDLVYTVGESDYTKDWFFAQVTRKKEGTKASYQGTTWQIQFKLDEVD
KSTNYTLRIALASATFSELQVRVNDPKVGNAPLFTSGLIGRDNSIARHGIHGLYWLYNVS
VPTTRLVQGDNTIFLTQPRSTSPFQGIMYDYIRLEGPPSSPSPTS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctcttggagtgaagttgtacattgaagatgaccatgtgatgatggataatggg
atagtacaaattacattgtcaaacccagatggaatcgttactggaatacgatataatggc
atagacaacttgcttgaagttcgtaatgaagaatccaatagagggtactgggacatggtc
tggaactcaccaaccactggtatcacaactggaatatttgatgtgataaaggggacgagt
ttgagtgtaattgtagaaaatgaggaacaagtggaaatttcctttacaagaacgtgggat
tcgtcaatgcagggcaagtttgcgcccttaaatattgacaagaggttcatactgcttcga
ggttcatccggattttacacctatgccatttacgaacactcaaaggaatggccaggtttc
aatcttggagaaacaagagttgcatttaagctcagaaaagacaagtttcactacatggca
gtagcagacaagaggcaaagaagcatgcccttacctgatgacaggttaccccctagaggt
caagccttagcatatcctgaggctgttttgcttctcaatcctattgagcctgaattaaag
ggagaggttgatgacaagtatcagtattcatgtgagaacaaggatatcaaggtccatgga
tggatctcaaaggagcctagtgtgggcttttggttaatcacacccagtcatgagtaccgg
tctggtgggccccttaaacaaaacctcacttctcatgtcggcccaactgctcttgcggtg
tttctgagtgctcattataccggagatgatttagtgccaaaatatgatgaaggcgagcag
tggaagaaggttttcggccctgtttttatctatgtcaactctttatttgatggaaacgac
cgacttcaattatgggaggacgctaaaatacagttaatgatcgaagagcagagttggcct
tatagtttcccagcttcagaagattaccccaagtcagaacaacgtggttatgttagtgga
agactacttgtcaaagacaggtatattaacagtgattacatttctgccaatggtgcatat
gtgggattggctccaccaggagaggttggatcgtggcaacgagaatgcaaggattaccaa
ttttggagcagagcagatgaaaatggctacttctccatcgattatgttcgtgaaggcgac
tataatctatacgcatgggtccctggtttcattggggattatcgttatgatatcgtcctt
accataacttctggttcatatgttgagatgggggatctagtctatgagcctccaagaaat
ggaccaacattgtgggaaattggcattcctgatcgttctgctgcagaattctatgtccca
gaacccaatccaaattttgtcaacaaactttatgtcaatcatcctgataagtttagacaa
tatggactttgggaaagatatgctgaactttatcctgataatgatttggtttacactgtt
ggtgaaagtgactacaccaaagattggttttttgctcaagttactaggaagaaagaaggt
actaaagcatcatatcaaggaactacttggcaaatccaattcaagcttgatgaagtggac
aagagcaccaactatacactaagaatagcattggcatcagctactttttctgaattacag
gttcgagtaaatgatccaaaggtgggaaatgctcctctgttcacaagtggattaatagga
agagacaattcaatagccagacatggaatccacggcctttactggctctacaatgtgagt
gtaccaacaactaggcttgttcaaggagataatacaatctttttaacacaaccaagaagc
acaagtccatttcagggaattatgtatgattatatacgcctagaaggacccccttcttct
ccatctccaacttcataa
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