Cannabis sativa (hemp): 115709802
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Entry
115709802 CDS
T08987
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115709802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115709802
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
115709802
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115709802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
115709802
NCBI-ProteinID:
XP_030493888
LinkDB
All DBs
Position
X:2001914..2004490
Genome browser
AA seq
380 aa
AA seq
DB search
MHSLKLSTTLIMNNKKIPIPSPSPSPPLAPPTPQLISKTLLKPTSTPKWLPLNLSKSELS
LPLTFPTGQTFRWKQTGPLQYTGPVGSHLISLKHLPNGDVSYCLHSSSSSSSKAEALMAL
RDFLNMGICLSDVWEVFSASDSRFAELAGHLGGARVLRQDPLECLMQFLCSSNNNIQRIT
KMVNFISSLGNHLGTVEGFEFHEFPSLERLSSVAEQELREAGFGYRAKYITGTVKLLQSK
HGGGLEWLLSLRKLDLDEAIDALLTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATR
HLLPELAGARLTPKLCSRVAEAFVNKYGKYAGWAQTVLFIAELPSQKAILPSHFSNAKPN
KSVKRKITETNIAEDGTEER
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcactcactgaaactaagcacaaccctaatcatgaacaacaagaagatacccattcca
tctccatctccatctcctcccttagctcctccaaccccccaactcatttccaaaaccctc
cttaaaccaacctcaaccccaaaatggcttcctctcaatctctcaaaatccgagctttcc
ttgcctctaaccttccccacaggtcaaaccttcaggtggaaacaaaccggtcctcttcag
tacaccggacccgttggctctcatctaatttccctcaaacacttaccaaacggcgacgtt
tcatactgccttcactcttcttcttcttcttcctccaaagccgaggctttaatggctttg
agggattttctcaatatgggtatttgtcttagtgacgtttgggaagtgttttcggcttct
gactcgagatttgccgagttggccggacatttgggtggtgcacgtgtgctcaggcaagac
ccacttgagtgtttgatgcagtttctttgttcttctaacaataacattcagagaataacg
aagatggtcaattttatttcttcattggggaatcatttagggactgttgaaggttttgag
tttcatgagtttccttctctggaacgattgtcaagtgttgctgagcaagagcttagagaa
gctggttttggttacagggctaaatatattactggtacggtaaagttgttgcaatcaaaa
catggtggaggcctagagtggcttttgtctcttcgaaagctcgatctcgatgaggccatt
gatgcccttttgactttgcccggagttggtcctaaagtagcagcctgcatagctctcttc
tctcttgaccaacaccatgccattccagtagacacacacgtttggcagattgcaacaagg
cacctgctgccagagttggccggtgctcgcttgacacctaagctgtgcagccgcgtggct
gaggcatttgtcaacaaatatggaaagtatgctggatgggctcagactgtactttttatt
gctgaattgccgtcgcaaaaggcaattctaccgtctcatttttcgaatgcaaaaccgaat
aaatctgtcaagagaaagattacagaaactaacatcgctgaagatggtaccgaagagcga
taa
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