Cannabis sativa (hemp): 115709960
Help
Entry
115709960 CDS
T08987
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115709960
Enzymes [BR:
csav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
115709960
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
115709960
Prokaryotic type
115709960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
DUF5978
Motif
Other DBs
NCBI-GeneID:
115709960
NCBI-ProteinID:
XP_030494096
LinkDB
All DBs
Position
3:complement(1707275..1712533)
Genome browser
AA seq
952 aa
AA seq
DB search
MPTITNHLRLLFHSSSSSIKLKPSFSFSLLPKPRLKPYSSSFTLLALSSNRRRPRFDPHP
SRGPGRRNISTFRERKSRERGVPMEGSNESSGFNKRRAEGRDKDDKPKKSLQLKSRKLNP
SNTICYLQILGTGMDTQDTSPSVLLFFDRQRFIFNAGEGLQRFCTEQKIKLSKIDHIFLS
RVCSETAGGLPGLLLTLAGVGEGLSVCVWGPSDLKYLVDAMRSFIPNAAMVNTKSFGPAL
GSNVNTMPEQQNSTKPIVLIDDEVVKISAIVLQPTVSEGKPGDMSVVYVCELPEIKGRFD
KEKALALGVRPGRKYSQLVEGQSVKSDHQDIMVHPSDVMDPSLPGPIVVLVDCPKESYLQ
QLLSTEHLNNYFADFSGLPESSKVVSCIIHLSPASVVNSPKYQNWMKRFGSAQHIMAGHE
RFARKNMKIPILKSSARITARLNYLCPQFFPAPDFCSLQQNGSSESSSIVSSEDSDGTLC
ESIGAENLQKFVLRPHSKHGLDKSCVPSLLVPTEIIDELHSEIPDIVVAAQNVSQLWNTS
TGSTGEISCVQDVKFMVEEPWLDENTLPSCLENISREDMEIVFLGTGSSQPSKYRNVSSI
HINLFSKGGLLLDCGEGTLGQLKRRYGVDGADDAVRGLRCIWISHIHADHHTGLARILAL
RHELLKEEPHEPILVVGPRQLKRYLDAYQRLEDLDMMFLDCQHTTKESLDAFKSIIESSN
DLISIGDPKSSKDIWKKPTDGQMAQKIDSTLFARGSRMQSYWQKSGSPVDNITEIKSLKK
ILGDAGLEALISFPVVHCPQAFGVVLKAAERTNSVGKSIPGWKVVYSGDTRPCEASIEAS
RDATILIHEATFEEGMVEEAVAKNHSTTEEAIEVGNAASAYRIILTHFSQRYPKIPVFDE
THMHNTCIAFDMMSVNVADLPVLPRVLPYLKMLFRNEMALEESDDVQESVLV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcccactatcacaaaccaccttcgtttactcttccattcttcttcttcttctattaag
cttaaaccctctttcagtttctccttacttcccaaacccagactcaaaccatactcatct
tctttcactcttcttgccttatcttcaaatagaagaagaccccgttttgatccccaccct
tctcgtggccctggcaggagaaatattagtacttttagagagaggaaaagccgggaaaga
ggagtgccgatggaggggagtaatgagtcttctgggtttaataagagaagggctgaggga
agggataaggatgataagcctaagaagagtttgcagttgaaatcgcgtaagcttaatcct
tcgaataccatttgttatttgcagatactggggactggaatggacacacaggatacatca
ccttcggtgttacttttctttgaccggcagagatttatctttaatgcaggagagggttta
caacgtttttgcacagagcaaaagatcaagttgtctaagatagatcacatatttctctct
cgtgtatgctccgagactgcaggtggccttccaggtttgcttttgacattggctggggtt
ggagaaggattgtctgtttgtgtatggggtccatcagatctgaagtacttagttgatgcg
atgaggtctttcatcccgaatgctgctatggttaatacaaagagctttggacccgcactt
ggctctaatgtaaacactatgcccgagcaacaaaactcaacaaaacccattgttcttatt
gatgacgaggttgttaaaatatcagctatcgttttgcaaccgacggtttcagaaggaaag
cctggtgatatgtctgtagtatatgtatgtgagttgcctgaaatcaaggggagatttgac
aaagagaaagcgctagctttgggtgttcgacctgggcgaaagtatagtcaacttgttgaa
gggcaatcagtaaagtcggatcaccaagatatcatggttcatccgagtgatgtaatggac
ccatctcttcccggtcccattgtagtactcgtagattgccccaaggaatcgtatttgcaa
cagttgttgtccacagagcatctcaataactattttgcggacttctcaggtttgcccgag
agttctaaggtggtgagttgtatcatccatttgagtcccgcatctgtagttaacagtcca
aaataccagaattggatgaagagattcggttcagcacaacatataatggctggacacgaa
aggtttgctaggaagaacatgaaaattccaatactcaaatcaagtgcaagaattacggcg
aggctaaattatctatgtccccagttttttccagctccagatttttgttctcttcagcaa
aatggttcctcggaatcaagctccattgtttcaagtgaggattctgatggaacactttgc
gaaagtattggcgcggaaaatcttcagaagtttgttttgcgacctcatagtaagcacgga
ttggataaatcttgcgtaccaagtttgttggtacccacagaaatcatcgacgaattacat
tctgagattccagatattgtagttgctgcccaaaatgttagtcagttgtggaatacatcc
actggatcgacaggagaaataagctgcgttcaagatgttaagtttatggttgaagagccg
tggttggacgagaatactcttcccagttgtctcgaaaatatatcaagagaggacatggag
attgtctttctcgggactggatcatctcagccatcgaaatatcggaatgtcagctctatc
catatcaatcttttctcgaaagggggtttgcttttagattgcggtgaaggaaccttagga
cagcttaaacgaagatatggtgtagatggcgctgatgatgcggtgagaggtctgaggtgt
atttggatttcccacattcatgccgatcaccacacaggcttggcgagaatactagccctc
agacacgaattgttgaaggaagagcctcacgagccaatactcgttgtaggaccgagacag
cttaagagatatttagatgcataccaaagacttgaagatttggacatgatgtttctcgac
tgtcagcacaccactaaagaatcactcgatgcgtttaagagcattatcgagtctagtaac
gacctaatttctataggagatccgaaaagttccaaagatatttggaagaaaccaactgac
gggcaaatggctcagaaaatcgattctactttgtttgctagaggatcccgaatgcagagc
tactggcagaaatcgggtagtccagttgacaatatcacagaaataaaaagcttaaagaaa
attctcggcgatgctggtttggaagccttgattagttttccggttgttcattgcccacag
gcgttcggtgttgtgttgaaggcagccgagagaactaatagcgttggaaaatctattcca
ggatggaaggttgtgtattctggcgacactagaccctgtgaagcttcgatagaagcatct
cgtgatgcaactattctcatacacgaggcaacgttcgaggagggaatggtcgaggaggca
gtggcgaaaaaccacagcacgacagaggaagccatagaagtggggaacgctgccagtgca
tatagaataattctcacacatttcagccaaagatatccgaaaatcccagtattcgatgag
acacacatgcacaacacgtgcattgcgttcgacatgatgagtgtcaacgtagcagatttg
cctgtgctcccgagagtacttccatatctgaagatgctgtttcgaaacgagatggcgttg
gaggagtcggatgatgttcaagaatccgtgttggtgtag
DBGET
integrated database retrieval system
