Cannabis sativa (hemp): 115709962
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Entry
115709962 CDS
T08987
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csav04990
]
115709962
Domain-containing proteins not elsewhere classified [BR:
csav04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115709962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Tricorn_2nd
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_SPT8
Beta-prop_WDR41
NBCH_WD40
Beta-prop_HPS5
PD40
ASA1
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
115709962
NCBI-ProteinID:
XP_030494100
LinkDB
All DBs
Position
3:3844133..3849627
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AA seq
609 aa
AA seq
DB search
MPDLAETYACVPSTERGRGILISGSPKSNSILYTNGRSVIILNLDNPLEVSVYAEHAYPV
TVARFSPNAEWIASADVSGSVRIWGTRNEFVLKNEFKVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYEGPPFKF
KQSNRDHSNFVNCLRYSPDGSKFISVSSDKKGILFDGKTGEKIGELSSEDGHKGSIYAVS
WSPDGKQVLTASADKSAKVWDVSEDGNGKVKRTLTCPGSGGVDDMLVGCLWQNDHLVVVS
LGGTISIFSATDIDKAPLCLSGHMKNITSLSVLKNNPKVILSSSYDGLIVKWIPGTGYSG
KLQRKENSQIKCFAAVEEEIITSGFDNKVWRVPVLGDQCGEANSVDVGSQPKDLSLALLS
PELALVATDSGVVMLRGTTIVSTINLGFAVTASAISPDGSEAIIGGQDGKLRIYAIAGDT
LTEEATLEKHRGAITVIRYSPDVSMFASADVNREAVVWDRSSREIKLKNMVYHTARINCL
AWSPDSSMVATGSLDTCVIIYEVNKPPASRSTIKGAHLGGVYGLVFTDDHHVMSSGEDAC
VRVWKLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccagacctcgccgagacttacgcctgtgttccttcgacggagcgaggccgagggatt
ctcatctccggaagtccgaaatccaattcaattctctacactaatggccgatccgtaatc
attctcaatctcgataatcctcttgaggtttctgtttatgctgaacatgcttatcccgtt
accgttgcaagattctctcccaacgctgagtggatcgcctctgctgatgtgtctggaagt
gtcaggatctgggggactcggaatgaatttgttttgaagaatgagtttaaggttctttct
ggtcggattgatgatcttcagtggtctcctgatgggatgaggatcgttgcttgtggtgat
gggaaaggaaaatcattggttcgtgcttttatgtgggattcaggaacaaatgtgggtgag
tttgatggccattcaaggagagttctgagctgtgcatttaagccaacacggccattccgt
attgccacatgtggagaggactttttggttaacttttatgaaggaccgccattcaaattt
aagcaatctaacagagatcattcgaattttgtcaattgtttgaggtattctccagatggg
agcaagttcattagtgtgagctctgacaagaaaggtattctctttgatggaaagaccgga
gagaaaattggagagctctcctcggaagatggacataaaggaagcatttatgctgttagc
tggagtcctgatgggaaacaggttttgactgcatctgctgataaatctgctaaggtatgg
gatgtatctgaggatggaaatggaaaagtgaaaagaacattaacttgtcctggctcaggt
ggtgtagatgacatgctagttgggtgcctatggcagaacgatcacctcgttgttgtttca
ctcggaggaacaattagcatattctcagcaactgatatcgataaagcccctctgtgtcta
tctgggcacatgaagaacattacttcattatctgttttgaaaaacaatccaaaagttata
ctgtccagtagttatgatggtctaatagtaaaatggattccaggcactggatatagtgga
aagttacagaggaaggaaaactctcaaatcaaatgttttgctgctgttgaggaggagatt
attacttctggttttgacaacaaggtatggcgagttcctgttcttggtgatcaatgcgga
gaggcaaattcagttgatgttggcagtcaaccgaaagatttaagccttgctcttctttct
cccgagcttgctttggttgcaactgattccggagttgtcatgcttcggggaacaaccatt
gtatcaactattaaccttggatttgctgtgacagcttctgcaatttcacctgatggaagt
gaagccatcattggtggtcaggatggtaaacttcgtatatacgcaattgctggcgacaca
cttacagaagaggcaacccttgagaaacaccgtggcgctattactgttattcgttactct
cctgatgtctcaatgtttgcatcagcagatgtgaaccgggaagctgttgtttgggatcgt
tcctctcgtgagataaaattaaagaacatggtataccacaccgcgcgtataaattgtctt
gcttggtctccagacagtagcatggttgctaccggatcactcgacacttgtgtcatcatt
tatgaagtgaacaagccgccagcaagccgttcaaccataaaaggcgctcacttgggcggt
gtttatggattagttttcaccgatgaccaccatgtcatgagctctggcgaggacgcctgt
gttcgtgtttggaagctaactccacagtga
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