Cannabis sativa (hemp): 115710069
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Entry
115710069 CDS
T08987
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115710069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115710069
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115710069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_1
TPR_12
Motif
Other DBs
NCBI-GeneID:
115710069
NCBI-ProteinID:
XP_060967520
LinkDB
All DBs
Position
3
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AA seq
863 aa
AA seq
DB search
MANDQDMSSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLETLSKKLKSKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATTVEEYLQQVHEMAIISAVQEA
QKDNLRSFNDYMLKVLEEDWQKEKRDSLQSLSRISTLPRTNMIVSSSGGARSGQIVSMTS
SPQASSGASSMQLVPLANKPILEKKAAVYAEVVKNLNEARERGLPFKPATAFKGAYESLG
LDASGGKSVHFQKIWHLIQALTGEDSSVPKNVSKKMSLIIGARRHLERGHEKYVMDTIQS
HPAQAALGGVVGNMQRIRAFLRIRLRDYGVLDFDAGDSRRQPPVDTTWQQIYFCLRTGYY
DEARNVAASSRSSHQFAPLLMEWINTGGMVPKEVAAAASEECDKMLRMGDRMSRAAYDKK
KLLLYAIISGSRKHIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPVGPPSVVISDNLVPYT
LDDLQGYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLIPAILYLSKEAGDEGYNIDAAHIS
IVLADHEIFSEGVGGGQKMGVMDANAEASSLIRQYGALYLRLGNLPMALEYYAQAAAAVG
GGQLSWSGRGTVDQRRQKNLMLKQLLTELLLKDSGIYLLLGTRGAGEEGQLNRFLNDEKS
RKQFLLEAAHQCQEAGLYDKSIEIQKRIGAFSMALDTINKCLSEAICAISRGRLDGESRT
SGFVHSGNEILETYKYHLEVSPQERESVTEQQTVLRQLEAILSVHKLVKLGHYIDALREV
ARLPFLPLDPRTPDIAPDVFQNLSPHVQACVPDLLRVALTCLDNVTDSDGSLRALRAKIA
SFIATNSSRNWPRDLYEKIARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatcaagacatgagtagctggacagatctcctccactcatcctcgaagctt
ctcgagcaagcagctccttcagctcaattccctcctcttcagagaaatttggatcagtta
gaaacattgtctaagaagctcaagtcaaaaaccctaagaactgaggctccatctcaatcg
attgctgccacaaggctgcttgcaagggagggaataaatgcagagcaacttgcgcgggac
ctgaagtcttttgaattgaaaacaacatttgaggatgttttccctgcagaggcaacaact
gttgaggaatatctgcagcaggtccatgaaatggcaattatttcagctgtccaagaagct
caaaaggacaacctcagaagttttaatgattacatgttgaaagtgttggaggaggattgg
caaaaagaaaagcgagatagtcttcaaagcttgagtcgaatttccacattacctagaact
aacatgatagttagcagtagtgggggtgctcgctctggtcagatagtgtcgatgacttct
agccctcaagcttcatctggtgcatctagcatgcagcttgtacctcttgctaacaagcct
atcctagagaaaaaagcagctgtctatgctgaagttgtaaagaatctgaatgaagcaaga
gaacgtggtttaccatttaaacctgctacagcttttaagggtgcttatgagagtttaggc
cttgatgcatctggtggaaaatccgttcattttcagaagatttggcaccttattcaggca
ttgactggtgaagactcatctgttccaaaaaatgtgtcaaaaaagatgtctttaattatt
ggtgcaaggcgccatcttgagcgcggtcatgagaaatatgtaatggatactatacaaagt
catcctgcccaggctgcacttggtggggttgttggaaacatgcaaagaattcgtgcattc
ctccggatccgtttgagggactatggagttctagattttgatgcaggtgattctagaagg
cagcctcctgtggatacaacttggcagcagatatacttttgcctgagaactgggtattat
gatgaagctagaaatgttgctgcgtcttcccgttcttcacaccagtttgctcctctgctt
atggaatggatcaacacgggaggtatggtgcctaaagaagttgcagctgctgcctcagaa
gaatgtgacaaaatgttaagaatgggcgatcgaatgagccgagctgcatatgacaagaaa
aagctgttattatatgctatcatatccgggtcacgcaagcacattgacagattattgaga
gatttacccacacttttcaataccatagaggacttcttgtggtttaaattgtcagctgtc
cgagactgcccagttggccccccttcagttgttataagtgacaacttggttccatacact
ctggatgatttgcagggatacctaaacaagtttgagccctcatattataccaaaaatgga
aaggaccctttagtatatccatatgttttgcttttaagcattcagttgataccagctatc
ttatacttgtctaaggaagcaggagatgaaggttataatattgatgctgcacacatatca
attgtgctggctgaccatgaaatcttttctgaaggtgttgggggtggacagaaaatgggg
gtgatggatgctaatgcagaggcatctagcttgattagacagtatggggccttgtatctt
cgtcttggtaatcttccaatggcactagaatattacgctcaagctgctgcagcagttggt
gggggacagttgtcatggtccgggagaggtactgtagaccaacgaagacagaaaaacttg
atgctaaaacaacttctaacagagctgttgttgaaagatagcggaatctatctgctactt
ggtacaagaggtgcgggagaagaaggtcaattgaatcggtttttgaatgacgagaaatct
agaaagcagttcttgcttgaagctgctcaccagtgtcaggaagctggattatacgacaag
tctattgaaattcaaaaaagaattggggcattttcaatggcattggatacaattaacaag
tgtctctccgaagcaatctgtgccatctcacgtggtagattggatggtgaaagccggact
tctggcttcgttcattctggaaatgagatattggagacgtacaaatatcatcttgaagtc
agtcctcaagaaagagagagcgttacagaacagcagacagtgttaagacaactggaggca
atactctcagttcacaagttggttaaacttggtcactatattgatgctctcagggaggtt
gcaagacttccctttcttcctctggatccaagaactcccgacattgcgcctgatgtgttt
caaaacttgtctcctcatgttcaagcttgtgttccagaccttctcagagttgcccttact
tgtctggataatgtcacagattctgatggatcgctccgggccttgagggcaaagattgcg
tcttttattgcgactaattcgagtaggaattggcctcgggacttgtatgaaaagatcgca
agaagcttatga
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