Cannabis sativa (hemp): 115710071
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Entry
115710071 CDS
T08987
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115710071
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115710071
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Helicases
115710071
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
115710071
NCBI-ProteinID:
XP_030495305
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All DBs
Position
3:complement(5225277..5230501)
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AA seq
795 aa
AA seq
DB search
MADRRPKPTQIQVSSKADLIRLEKQRKKAKSGGFESLGLSPNVFRGIKRKGYIVPTPIQR
KTMPLILAGNDVVAMARTGSGKTAAFLVPMIERLKQHVPQSGVRALILSPTRDLALQTHK
FTKELGRFTDLRISLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEY
VVFDEADCLFGMGFAEQLHKILAQLSENRQTLLFSATLPSALAEFAKAGLRDPLLVRLDL
ETKISPDLKLAFFTLRHEEKNAALLYLVREQIGSDEQTLIFVSTKHHVEFLNMLFREEGI
EPSVCYGDMDQDARKINISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFV
HRVGRAARAGRKGTAFSFVTTEDMPYLLDLHLFLSKPIWPAPAEEEVLDDKDGILSKIDD
AIANGETVYGRFPQTVIDLVSDRLREVIDSSGELSSLMKTCVNAFRLYSKTKPSPAKESI
RRSKELPPEGLHPMFKNVLGGGELMALAFSERLKTFRPKQTILEAEGEAAKSKHLQGSSS
QWTDVMKKKRAIHEQIINLVQQQRSNTIAEKEIEDDRASVIGKDNKEAGSKRKERNFKDE
EFFISSIPTNHISESGLSVGANQEFGSNRFEAAVLDLVADDTAGMQRQKSVYHWDRRSKK
YIKLNSGDRVTASGKVKTESGARVKANKTGIYKKWKEHSHNKISFRGGEENTDERPGRSF
AGRSQGDNRKFKGKRNQNHVPNAHVRSEIKDLDQVRKERHKKATQISYLKGKSNSRGKKG
GKFAKRGKSKRSSAK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgcagacctaaaccgactcagattcaagtgagctcgaaagcagatttaatc
cggttggagaagcaaagaaagaaggccaagtcaggaggtttcgagtcattgggtctaagt
cctaatgtatttcgaggaatcaagcgcaagggctacattgtcccaactccaattcagagg
aaaactatgcctctcatcctcgctggaaacgacgttgtagccatggcccgtaccggttcc
ggcaagacagccgcttttcttgttcccatgattgagcgattgaagcagcacgtgcctcag
agcggcgttagagctctaatcctttctcctaccagggatttggcacttcaaacgcacaag
ttcactaaggagctcggacgctttacagatcttcgtattagtttactagttggaggtgat
agtatggaaagtcagtttgaagagttagcccaatctcctgatatcataattgcaactcct
ggtaggctaatgcaccatttgtctgaggtggatgacatgtcactgcgcactgtagaatat
gttgttttcgatgaagctgattgtctatttggcatgggttttgctgagcagttgcataag
attcttgcgcagttgagtgaaaatcgtcaaactttgcttttcagtgcaacattacctagt
gcccttgctgagttcgcaaaggctggtttgcgagatcctctgcttgtgcggcttgatttg
gaaactaagattagccctgatttgaaacttgcatttttcaccttaagacatgaagaaaag
aatgcagctttactttatttggtaagggaacaaattggttctgatgagcagacattaata
tttgtgtccacaaagcatcatgttgagttccttaatatgttgtttagggaagagggtatt
gagccttctgtatgctatggtgatatggaccaagatgctcgcaagattaatatatcaagg
tttagggcaaggaaaactatgtttctcattgtgactgatgttgcagccaggggcattgat
attccgttgcttgataatgtcataaattgggatttccctccaaagcctaaaatttttgtt
catcgtgtcggaagagctgccagggctggtcgaaagggtactgcattttcttttgttaca
actgaggacatgccttatcttttggatcttcatctatttctctcgaaaccaatttggcct
gcaccagctgaggaggaagttcttgatgataaagatggtatattgtccaaaattgatgat
gccattgcaaatggagaaacagtctatggacgctttccccagacagtaattgatcttgtt
tcagatagacttagggaagtcattgattcctctggcgaattgagttctttgatgaaaacc
tgtgtaaatgcatttcgtttgtattcaaagacaaaaccatcacctgcaaaggaatccatt
agaagatcaaaggaattacctcctgaaggtttgcatccaatgttcaaaaatgttcttggt
gggggagagttaatggcactggctttttctgagcgtttgaagacatttagaccgaagcag
accatacttgaagctgaaggggaagctgctaaatccaagcatttacagggttcttctagt
caatggactgatgtgatgaagaaaaaaagagctattcacgagcagataattaacttggtt
caacagcagcgttctaatactattgcggagaaggaaatagaagatgacagagcttctgtg
ataggaaaggataataaagaagctggttctaaaaggaaagaaagaaacttcaaggatgaa
gagttctttataagttctataccgacaaatcatatttcagagtcaggactctctgttgga
gctaaccaggaattcggttcaaataggtttgaagctgcggtgttagatttagttgccgat
gatactgcaggaatgcagagacaaaaatctgtgtatcactgggacaggaggagtaaaaag
tacatcaaattaaatagtggtgaccgtgttacagctagtgggaaggtaaagacagaaagt
ggtgcaagagtaaaagctaacaaaactgggatatacaagaaatggaaagaacattcacac
aataaaatatcttttagaggtggtgaagagaatactgatgaacgccctggacgatctttt
gcagggcgatcacaaggtgataacagaaaatttaagggtaagcgaaaccagaaccacgtg
cctaatgctcatgtacgttccgaaatcaaagatcttgaccaagttagaaaggagagacat
aagaaggcaacgcaaatttcttatctgaagggcaagagtaacagccggggtaaaaaaggt
ggcaaatttgcgaaaagaggaaagtcgaaaagatcgagtgctaagtag
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