Cannabis sativa (hemp): 115710191
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Entry
115710191 CDS
T08987
Name
(RefSeq) leucine-rich repeat extensin-like protein 5 isoform X1
KO
K13095
splicing factor 1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115710191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115710191
Spliceosome [BR:
csav03041
]
Complex A
Other components
Complex A specific factors
115710191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115710191
NCBI-ProteinID:
XP_030494394
LinkDB
All DBs
Position
3:complement(48139717..48145229)
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AA seq
720 aa
AA seq
DB search
MSGAAVSSTSTGTSQKVPMFASKAGFVIPKNKLSGSLVPIFRGVKNPGGTDTLNGESTKL
TPRKTKWGPDLTQDASVRRVRAFAFQTRVDQITQQLKSGISETGLSGNSVLDSESPNHEL
SSHQNAIEKLEELELEKREAIGEILKLNPSYKAPSDYKPLMKEARVSIPVKEYPGYNFVW
LIFGPGGENLKRLEKVRKETGAKIQVYRTNVDNEQKIEIKQSDGNEVHNTYEDLYVHISA
DTFEKVDAAVTVIELLITSVKGNLASASAASNSASAADAHVSLGQDVATSNPVLNSAMQS
MQGPTSMPPQGQFQYPGQWFPGGPPPNMVLHPPSGFNPPNSSALGLNTPAHMHSNMPSLF
GRPPVQGGFNSIPQNPNLVSHESRPPAQVLQHQYMVQTGPGPFEPRNPSLMAPQFSSVPA
SNALVPYPSTGSQLSPMSFTRPSMPSLPQGSQPANIPPPAGFGNMAPRMVPTHLHPVVSP
HAPAPMYGSLGNPTLGSASNPPPGPSMQSGIINSVNAANFTPAKPQLQTGPSSGSFTFQP
HRPQNPPSQAGLRPNTHFSQNAPPANSILPSPASQPLRMPMPNLSQPGNHGFARPPGNHT
GQPQSHISGSPFVRDPTGISVPSRLPTFPDGSALAPRNQMMPGGPGPWNFNPSPQIPSFP
GPFPPRPGNHGQHQNYPVRASHSFASGRSAQAPGEHQLYDPFSPTSMSITPQHQGGFPRR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcagctgtttcatcgacatcaacaggtactagccaaaaagttcctatgttt
gcttcaaaggctggttttgtcataccaaaaaacaagttgtctggttcattggttcccata
ttccgaggagttaaaaatcctgggggcactgatactttgaatggagaaagtaccaaactg
actccaaggaaaacaaagtggggacctgatctgactcaggatgcttctgttaggagggtg
agagcttttgcttttcagactcgggttgatcaaattacacagcaactcaaatctggaata
tcagagaccgggctcagtggcaactcagtgctagattctgaaagtccaaatcatgagttg
tccagtcatcaaaatgccattgagaagttagaagaattggagcttgaaaagcgggaggca
ataggtgaaatattaaaattaaatccaagttacaaggctccatctgattataaaccgttg
atgaaagaggccagagtgtccatacctgttaaagaatatcctggttataattttgtttgg
ctaatatttgggcctggaggtgagaacttaaaacgattggaaaaggtaagaaaagaaact
ggagctaagattcaagtctacagaaccaacgtagataatgaacagaagattgagattaaa
cagtctgatgggaatgaagtccacaatacctacgaagacttatacgtccatatatcagct
gacacgtttgagaaagtagatgctgctgttactgtcattgagctcctaatcacctcagta
aaaggtaacttggcttctgcatctgcagcctctaactcagcttctgcagctgatgcccat
gtttctttaggccaggatgtggccacttctaacccagttcttaattctgcaatgcaatcg
atgcaaggacctacatcaatgcctccacaaggacagtttcagtaccctggtcaatggttt
cctggaggcccaccacctaacatggtgttacatccaccttccggcttcaatccaccaaat
tcttcggctcttggtctgaacacccctgctcacatgcattcaaacatgccttcactgttt
ggccggccaccagttcaaggtggattcaactccattccccaaaacccaaatcttgtttcc
catgaatcacggccaccagcacaagttttacaacatcaatacatggttcagacaggtcct
ggtccttttgagccgagaaatccttctttgatggctccacagttttcctcagttccagca
agtaatgctttggttccatatccatctacaggaagccaactttcaccaatgagcttcacc
aggccgtcaatgccttcattaccacaggggtctcaacctgccaatattccaccacctgca
ggttttggcaatatggctccaaggatggttccaacacatttgcatcctgtagtttcacca
catgcacctgcacctatgtatggttctcttgggaaccctactttaggatctgcatcaaat
cctccaccaggcccatctatgcaatcaggaattataaattctgtaaatgcagcaaatttt
actcctgcaaaaccacaattgcaaacaggtccaagttctggtagttttacttttcaacct
caccgtccacaaaatccaccctctcaggcaggactcagaccgaacactcatttctctcaa
aatgctccacctgccaattcaatattaccaagtccagcatcccagcctttacgaatgcca
atgcctaatttgtctcaacctggcaaccacgggttcgcaaggccacctggcaaccacact
ggccaacctcaatctcatatttctggcagtccctttgtcagagatccaactgggatttca
gttccttccaggcttccaacatttccagatggaagtgcccttgcacctaggaatcaaatg
atgccagggggacctgggccgtggaacttcaacccgtctccccaaattcctagttttcct
ggtcctttccctcccaggccaggaaatcatggccagcatcagaattatcctgttcgagca
agtcactcctttgcttctggtagatcagctcaagctcctggagaacatcaactttatgat
ccattctcaccgacatcaatgtcaattacaccacaacaccagggaggattccctagaagg
tga
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