Cannabis sativa (hemp): 115710195
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Entry
115710195 CDS
T08987
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115710195
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115710195
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Gliadin
PilZN
Motif
Other DBs
NCBI-GeneID:
115710195
NCBI-ProteinID:
XP_030494398
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Position
3:complement(1900503..1904768)
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AA seq
424 aa
AA seq
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MKRFNLFLPLLLTLLTFSCFHFSNAKNPKNPFAINTLRPLSSHHGSSSSHGFPSQVFNVD
DFGAKGDGTDDRKAFNKTWNKACSSKGGIFLVPKKRTYLLGPMNFTGPCKFSLLTFKIAG
TIEASTEQNEYIKDMWHWLVFVSVKNLRVEGGGTFDGKGKIWWKKSCTVFKSLSCVRAPI
AVTFFDCKNLNVTNIWFKDSQKFHLFFDSCDNVKANHLLVTAPSNSPNTDGIHLRGSQNI
HLMNNIIQTGDDCISIINGSSNVIATDISCGPGHGISIGSLGPNNTESQVSNVTVDRVTM
LGTTNGVRIKSWQGGSGYGENIIFQNIEMHNVTNPIIIDQYYCDQMEPCPEQYSAVKISN
VVYSNITGSSFSEVAVKINCSKTFECEEISMRNVNLVREGNGVVKAFCSNVGFTQKELVF
PSCS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattcaatctttttcttcccttactactaactctacttactttttcttgtttt
cacttctctaatgccaaaaaccctaagaacccatttgccattaacactcttagacctctt
tcaagccaccatggaagctcaagctctcatgggtttccatctcaggtctttaatgtagat
gattttggggccaaaggtgatggaacagatgacagaaaggcatttaacaagacttggaat
aaggcttgttcatccaaagggggtatttttttggtcccaaagaaaaggacttatcttctt
gggccaatgaatttcactggtccttgcaaattttctctgcttactttcaagattgctgga
acaattgaagcttcaactgaacaaaatgagtacataaaggatatgtggcattggcttgtg
tttgtaagtgtgaaaaacttaagagttgaaggtggtggaacttttgatggtaaaggaaaa
atatggtggaaaaaatcttgcactgtcttcaaatctctttcttgtgttcgcgcaccaatt
gcagtaactttctttgattgtaagaatctaaatgtgaccaatatttggttcaaagattca
caaaaattccatctattctttgattcatgtgataatgtcaaagctaatcatctattagta
actgcaccaagtaatagtccaaacacagatggaattcatttgagaggttcacaaaatatt
catttgatgaataatattatccaaacaggtgatgattgtatttctattataaatggatca
agtaatgttatagctacagatataagttgtggccctggtcatggaataagtattggtagc
ttaggacctaataatacagaatctcaagtctctaatgtgacagtggatagggtaacaatg
ttgggaactactaatggagttagaataaagagttggcagggtggttctggttatggagaa
aacataatatttcaaaacatagaaatgcacaatgtcaccaaccccatcatcatagatcaa
tactattgtgatcaaatggaaccttgtccagaacagtactcggcagtaaaaataagcaat
gtggtgtacagtaacataacagggagtagtttctcagaagtggctgtaaaaatcaattgt
agcaaaacttttgaatgtgaagagatttcaatgagaaatgtgaatttggtaagagaagga
aatggtgttgttaaagctttttgtagtaatgttggattcactcaaaaagaattggttttt
ccttcatgctcatag
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