Cannabis sativa (hemp): 115710197
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Entry
115710197 CDS
T08987
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03430
Mismatch repair
csav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115710197
03460 Fanconi anemia pathway
115710197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115710197
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115710197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115710197
NCBI-ProteinID:
XP_030494405
LinkDB
All DBs
Position
3:complement(12010002..12022577)
Genome browser
AA seq
732 aa
AA seq
DB search
MADAMEVDLQEERVFKDPPNIRRLDETVVNRIAAGEVIQRPVSAVKELVENSLDAHSSSV
NVVVKDGGLKLIQVTDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRGEALASM
TYVGHVTVTTITKGQLHGYRVSYKDGVMEREPKACAAVKGTQIMVENLFYNMSARRKTLQ
NSADDYSKIVDLLSRFAIHHTSVSFSCRKHGAARADVHSVGTRSRVDAIRSVYGVSIAQN
LMKIEASDNDLSSSVFKMDGLISNFNFVAKKITMVLFINDRLVEWTALKRALEIVYSATL
PKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEVIIEKIQSLVESKLRNSNDTRTFQ
EQTIEPSSSGQVCSLKDSDINPSPSGSKPPKVPVHKMVRTDSSDPAGRLHAYMQTKSHSH
LDGISSLTSVRSSIRQRRNPKETADLTSIQELIDDIDGNSHSSLLDIVRHCTYVGMADDV
FALLQHDTHLYLANVVNLSKELMYQQVLRRFAHFNAIELSNPASLKELSMLALKEENLNP
ECAVNDDLNEKIAEMSAALLKQKREMLEEYFCIHIDIDGNLTRLPVVLDQYTPDMDRVPD
FVLCLGNDVDWENEKTCFQAIAAALGNFYAMHPPMLPNPTGDGLKFYEKKRPSQNTEDIE
TPSGDNAIMTTEIDNELLSEAETAWAQREWSIQHILFPAIKLFLKPPASMANNGTFVRVA
SLEKLYKIFERC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcaatggaagtcgacctacaagaagagcgtgtctttaaagaccctcccaac
atccgtcgtctagacgaaaccgtcgttaatcggattgccgccggagaggtcatccaacgc
ccggtctccgccgtcaaagagttagtcgagaacagtctcgacgcccactcgtcctctgta
aacgttgtcgtgaaggacggcggcctgaagctcatacaagtgactgatgacggccatgga
atccgctacgaggacttgccgatactttgcgagaggcatacgacttcgaagttgtctact
ttcgaggatttgcagtcgattaagtctatgggttttcgaggagaagcgttggcgagtatg
acctatgttggacacgttacagttaccacaattacaaaggggcaattgcatggttacagg
gtatcttataaggatggagtcatggagcgtgaacccaaagcatgtgctgctgtaaaagga
acccagataatggttgaaaatctattctataatatgagtgctcggagaaagacactacaa
aattctgctgatgattactcaaagattgtagacttattaagccgctttgcaattcatcat
acaagtgttagtttctcatgtagaaagcacggcgctgccagagcagatgttcattctgtt
ggcacacgttcaagggttgatgctattagatctgtttatggggtgtcaattgcccaaaat
cttatgaaaatagaagcttctgacaatgacctatctagttcagtttttaagatggatgga
ctcatctccaatttcaattttgttgcaaagaagataacaatggttcttttcataaatgat
agattagttgaatggactgctttgaaaagagctcttgaaattgtttattctgcaacattg
ccaaaagcatcaaaacccttcatatacatgtccattgtactgccaccagagcatgtggat
gtgaatgttcacccaactaaaagagaggtaagccttttgaatcaagaagtcatcattgag
aagatacaatctctagttgagtcaaaattgaggaactcaaatgacacaaggacatttcaa
gaacagacaattgagccatcttcatctggtcaagtgtgttcgctaaaggattcggatatt
aatccttcaccatctggatcaaaacctccaaaggttccagtgcataaaatggttagaaca
gattcatcagatcctgctggaaggttgcatgcctacatgcaaaccaaatcccatagccat
cttgacgggatttctagtttgacttcagtaaggtcatctataagacaaagaaggaaccca
aaggaaactgcagatctcactagcatccaggagctcattgatgacattgatggcaattct
cattctagtttgctggacattgtaagacactgtacatatgtcggaatggcagatgatgta
tttgcactgcttcagcatgacactcatctctatcttgcaaatgtagtgaatttgagcaaa
gagctaatgtatcagcaagtattgcgtcgttttgcccatttcaatgctatagagctaagt
aatccagcatcactgaaggagttaagtatgttggcattgaaagaggagaatttaaatcca
gaatgcgcggttaatgatgatttgaacgagaagattgccgaaatgagtgcagcgctattg
aagcagaaacgtgaaatgctagaagaatatttttgcattcatatagacatagatgggaat
ttgacgagacttccagttgtacttgaccagtacacacctgacatggatcgtgttcctgac
tttgtcctttgtttgggaaatgatgtggattgggagaatgaaaaaacttgctttcaagca
atcgcagcagctcttggaaacttctatgctatgcatccaccgatgttgcccaacccaact
ggtgatggtttgaaattttatgaaaagaaaaggccttcgcagaacactgaagacatagaa
actccgtcaggggataatgccatcatgacaactgaaattgacaatgaattactttcagag
gcagaaactgcatgggcccagcgtgagtggtcaatccagcatatcttgtttccagccata
aaactctttcttaagcctccagcttccatggctaataatggaacatttgttcgggttgct
tctttggagaaactctacaagatatttgaaagatgctaa
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