Cannabis sativa (hemp): 115710250
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Entry
115710250 CDS
T08987
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115710250
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115710250
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
90S particles
Helicases
115710250
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Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
SecA_DEAD
MACPF_SNTX
SR-25
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
115710250
NCBI-ProteinID:
XP_060967787
LinkDB
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Position
3:27461330..27465917
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AA seq
427 aa
AA seq
DB search
MEKGTSFLFAGVHFNKKKFSTDFSRFQKKKENDELVENLSLNENRESDESEEEEKDEEKV
RVKKRKRKAVGSGPSESVEGFSVFKSSKSVEATVKEENEKTEKKLSQEKKKFYQQQERDA
LFRKEHNIHVAGNTVPSPLTDFEELSSRYGCKAKLLRNLADLGIKQPTPIQRQAIPILLS
GRECFACAPTGSGKTLAFVCPMLMKLKPASKDGVGAVILCPTRELASQTIRECKKFAEGS
KFCIKLMTKQLIRKADLSKFSCDILVSTPLRLKLAIRKKKLNLSRVQYLVLDESDKLFEL
GLLKQIDCIVKACSNPSIVRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASENVKQK
LVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYAELLVDDIRVDVIHSDLTQE
QASSCYL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcacttcttttttgttcgctggagtccattttaataagaagaaattctcc
acagacttttccagattccagaaaaagaaggaaaatgatgaattagttgagaatttgagc
ttgaacgaaaatagagaatcagatgaatcagaagaagaagaaaaagatgaagagaaagta
cgtgtgaagaagagaaagagaaaggcagttggttctggaccttccgaatctgtggaggga
tttagcgttttcaagagttcaaaatcagttgaagctacagtgaaagaagagaatgagaaa
actgagaagaaactttcccaagagaaaaagaaattttatcagcaacaggagcgggatgca
cttttcaggaaggagcataacattcatgttgctgggaatactgtcccatccccacttaca
gatttcgaagagttaagctcaagatatggatgtaaggcgaaattattacgtaacttggca
gatcttggaattaaacagccaacaccaatccaaaggcaggctataccaatcctgttatct
gggcgggaatgcttcgcttgtgctccaactgggtctggcaaaactttggcttttgtttgt
cccatgcttatgaaacttaagcctgcttctaaagatggtgttggagctgttatcctttgc
cctacacgtgaattggcatctcaaacaattagagagtgtaaaaagtttgctgagggaagt
aaattttgtataaagttaatgactaagcagcttatacgaaaagctgatttatcgaagttc
tcttgtgatatattagtatctactccacttcggttaaagttagctattcgaaagaaaaag
ttgaatttaagcagggttcaatatcttgtactggatgaatctgataagctatttgagctt
ggcttgttaaagcagattgattgtatagtcaaagcatgctcaaatccttcaatagtacgt
tcattatttagtgctactttacctgattttgttgaggagcttgcacgtacaataatgcat
gatgctgttcgagttattattggcaggaagaatacagcttctgaaaatgtcaagcaaaag
ttggtttttgctggaagtgaagaagggaaacttttagcacttcgtcaaagctttgcagag
agtctgaatccgccagtgttaatcttcgtccagagcaaggagagagctaaagaactgtac
gcagaactgttagttgacgacattcgagtggatgtcatccattctgatctgacacaggag
caggcaagttcttgttatctttaa
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