Cannabis sativa (hemp): 115710292
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Entry
115710292 CDS
T08987
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115710292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115710292
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
RNases
115710292
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
115710292
NCBI-ProteinID:
XP_030494517
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Position
X:complement(39135044..39141206)
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AA seq
573 aa
AA seq
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MPSPVHAAEADNDCSNDASTIADNDKASNFFDIYGPQAKAEVVFTVPEATSTLNLQDVQG
LVTWVLAEGFMPTWAFIKNKPLIPKVVLLYIPGLDAALYLSHSKMLRTLKEFCGKPRAVL
ALSCISDGMQTIDTLLTCKVKRKRDQRDQREPNSTSEPEKCDSETVEQSFIELKKDIPFP
ITYYTLTEKEMEDNGYCLNKPGFISTISAPSEASPYDLLALDCEMCITSEGFELTRVTLV
DVQGQVVLDKLVKPSNNITDYNTRYSGITSDMLNDVTTSLKDVQEDFLKLVYKETVLVGH
SVENDLLALKISHNLVIDTAVLYKHPRGRSHKTALRVLAKRFLSKEIQQSGDGHDSTEDA
RTALELALLKINNGPDFGSPPSLIRRKLLTVLSDSGKVSSMIDDVSIVKRYASESSHAFP
VSSDDEALSKARKEVKNEKVHFVWTQFSELNSYLKKEAANPEKLNVKLAEMMSLLTCRDK
PGNKKGSKSKVTPELKEILARMDSRIRYLHNALPTNAMFIVCTGHGDTATVHRVRKMLAE
GPETTMCRANLVKVLEELQAQAEVALCFVGVKH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgccggttcatgctgccgaagccgacaatgactgctccaacgatgcctcaacc
atcgctgacaacgataaagcttccaatttcttcgacatttatggccctcaggctaaagca
gaagttgtttttacagtaccagaggctacctctactttgaatttgcaagatgttcaagga
cttgtaacttgggtgcttgctgaaggattcatgccaacatgggctttcattaagaacaaa
cccctcatcccaaaagtggttctgctctacattccaggcctagatgcagcattgtactta
tcacattccaaaatgcttcgcactcttaaagaattctgtggaaaacccagggcagttttg
gcgcttagttgtatatcagatggaatgcaaacgattgatacactcctaacatgcaaggtc
aaaagaaagagggatcagagggaccaaagggagcctaactcaacaagtgaaccagaaaaa
tgtgattctgagacagttgaacaatcctttatagaacttaagaaagatatacctttcccc
attacatattacactcttacagaaaaggagatggaagacaatggctactgtcttaataag
ccaggttttatttctactatctctgctccatcagaagcatctccatatgatttgttggca
cttgattgtgagatgtgcataacaagtgagggttttgagctgacaagagtgaccttagtg
gatgttcaaggccaggttgtgctagataaactggttaaaccatcaaacaatattaccgat
tacaacaccagatatagtgggattacgagtgacatgttaaatgatgtgactacaagtctt
aaagatgttcaggaggattttctaaagctggtttacaaggagactgtcttagttggacat
tctgtggaaaatgacttgttagcattgaagatctctcacaatctggtaattgatactgca
gttctgtacaagcaccctcgtgggagatctcataaaactgctttacgagttcttgccaag
agatttctttctaaggagatacagcagtcgggggatggtcatgacagcactgaagatgca
aggactgcattggaactggcacttttaaaaattaataatggtcctgattttgggtcaccg
ccatcattgataaggagaaagctccttacagtcctaagtgattctggaaaagtctcatct
atgattgatgatgtttcgatagttaaacgatatgcttcagaatcatcccatgcgtttcct
gtatcttctgatgatgaagctctttcaaaagccagaaaggaggtaaagaatgaaaaggtt
cattttgtttggactcaattctcagaattgaattcctatctgaagaaagaagcagcgaat
ccagagaaattgaatgttaaacttgcagagatgatgtctttgcttacctgtcgtgataaa
cctgggaataaaaagggcagcaaatctaaagttacacctgaactgaaggaaattcttgct
cgtatggattctagaatccgttatcttcataacgccttacctactaatgccatgtttata
gtttgcaccggtcatggtgacacagcaactgtccacagagtgaggaaaatgctagcagag
ggccctgaaacgactatgtgcagagcaaaccttgtgaaggtgttggaagagcttcaagcc
caagctgaggtagccttatgttttgttggagtaaaacattga
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