Cannabis sativa (hemp): 115710316
Help
Entry
115710316 CDS
T08987
Name
(RefSeq) protein CNGC15b isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115710316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115710316
Ion channels [BR:
csav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115710316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQCJ-SCHIP1
DUF6050
Motif
Other DBs
NCBI-GeneID:
115710316
NCBI-ProteinID:
XP_030494545
LinkDB
All DBs
Position
3:complement(25372437..25377361)
Genome browser
AA seq
720 aa
AA seq
DB search
MASCTSKYVRFLDDLELPKFKLDKESYIFKLTSMMDRKIAPKLRSKKPESNNTGRTLRVK
ELSRVFSEDYEVVEKLVLDPRGPVVSKWNKVFLVACLVSLFVDPLFFYLPTVRKNYCIGI
SLPLEASLTVIRSLVDAFYIVQISIRFRTAYVAPSSRVFGRGELVIDTRKIASRYLRKHF
WLDLVAALPVPQVIIWAALPYLRGSRMINSRNILRLTIILQYLLRLYLIFPLSSEIVKAT
GLVTETAWAGAAYNLMLYMMASHVLGSCWYLLALERQEHCWTRVCNLEYPICRNWYFDCR
IANHNERVEWFKASNISRHCGSGSQLFEFGIYGEALKFRVLSLDFFSKYFYCLWWGLKNL
SSLGQNLLTSTIVEEITFAIIVAILGLVLFSLLIGNMQTYLQSTTVRLEEWRIRRTDTEQ
WMRHRQLPHELKQNVRRYDQYRWIATRGVDEEAILKDLPVDLRRDIKRHLCLDLVRQVPL
FDQMDEKTLDAICERLKPSLSTAGTCLVREGDPVNAMLFIIRGHLDSCTTNGGRTGFFNS
CRIGPGEFCGEELLTWALDPRPGVVLPSSTRTVKAIAQVEAFALISDDLKFVAAQFRRLH
SKQIRQTFRFHSPQWRTWAACFVQAAWFRYKRRKEALELKRMESFISASSSSPSSEDRSR
SEESSGSGSTGMGLGVAYKGKLGGSVRSGSKRLGAEFDILSSLKKPVEPDFTDEDDRRRT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttgtacatcaaaatatgtaagatttcttgatgatcttgaattgccaaagttc
aaactagacaaagaaagttatatattcaagcttacctccatgatggataggaaaattgca
cccaagctcagatccaagaagcctgaaagcaacaacacaggaagaactttgcgagtaaaa
gaactttcaagagtattttctgaggattatgaggtagtggagaagttggtattggatcca
cgaggcccggttgtgagcaaatggaacaaagttttcttagtagcatgtttggtctctctg
tttgttgatcctttgttcttttacctgccaactgttaggaaaaattattgcattggtata
tccttaccccttgaagcttctctcacagtcattaggtcactagtggatgcattctacatc
gttcagatttccattcggtttagaacagcttatgttgctccttcctctagagtatttggt
agaggagagcttgttattgacactagaaagattgcttcaagatatcttcgcaaacatttt
tggcttgatcttgtggctgcactgcccgttccacaggtgataatttgggcagcattacca
tatctgagaggttcaagaatgattaattcgagaaatattcttaggctcaccatcatttta
cagtatctcctgcgcctttatcttatttttccactttcatctgaaattgtcaaggccacc
ggccttgtgacagaaacagcatgggctggagcagcatataatcttatgctctacatgatg
gcaagccatgttttggggtcctgttggtatctcttagcattagagcgccaagaacattgt
tggactcgtgtttgtaatcttgagtatccaatttgccgcaattggtattttgattgccgc
atagcgaatcacaatgaaagagttgaatggttcaaggcaagcaatatctcaaggcattgt
ggctcaggtagtcaattatttgaatttggtatctatggcgaagctttaaaatttagagtt
ttgtcattagacttcttcagcaagtatttctattgcctttggtggggactgaaaaatcta
agctctctaggccagaatcttcttacaagcactattgttgaagaaattacttttgccatt
atcgtagccattctaggattggttctcttctcattgctcatagggaatatgcaaacatac
cttcaatcgacaaccgtgagactggaagagtggaggatcaggagaaccgatacagagcaa
tggatgcgtcacaggcagctaccacacgagctaaagcagaatgttcggagatacgatcag
taccggtggatcgcaaccaggggagttgacgaagaagccattctcaaagaccttcccgtc
gatctccggcgagatatcaagcgccacctctgtctcgatctagttcgacaagttccgctt
ttcgatcaaatggacgagaagacgcttgacgcgatctgtgaaaggcttaaaccctcactt
agtaccgccggaacttgcctggtccgagaaggcgatcctgtcaacgcaatgctcttcatt
atccgaggacatttggattcgtgcaccacaaacggtggccgtaccgggttcttcaactcg
tgccggatcggtcccggcgagttctgcggcgaggagctactaacttgggcgcttgatcct
cgtcccggcgtggtgctcccgtcgtctacacgtacggtcaaagccattgcgcaagtcgag
gcctttgctctgatctccgatgatctgaaattcgtggcggctcaattccggcgactgcac
agcaaacagatacggcaaacgttcaggttccactcccctcagtggcgaacatgggcggct
tgcttcgtccaagcggcgtggtttcgttacaagagaaggaaggaagctttggagctgaag
aggatggagagtttcatttcagcatcatcgtcgtcgccttcgtcggaggacagatccaga
tcggaggagagttccggctcgggaagcacaggaatggggttgggggttgcatataaggga
aagctaggtggaagcgttagaagcgggagtaagaggttaggggctgagtttgatattctc
agctcgttgaaaaagccagttgagccagattttacagatgaagatgatagaagaagaact
taa
DBGET
integrated database retrieval system
