Cannabis sativa (hemp): 115710428
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Entry
115710428 CDS
T08987
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115710428
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115710428
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115710428
NCBI-ProteinID:
XP_060968118
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Position
3:54329540..54333777
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AA seq
444 aa
AA seq
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MRLEKYFRVELLIIVLFAILFPNYTRANIKDFDEVWQQRAIQARKNAHKAYHPDPHKVTQ
DFNYHVHKGIEDDDVDSNKTNSRRNLKSQKSGCTATNPIDRCWRCDKDWFKHRKRLANCA
LGFARGTTGGKHGKIYVVTDPSDNDLVNPKPGTLRYAVIQPEPLWIIFAHDMIIRLAEEL
IVSSHKTIDGRGARVHISNGGQITLQFVENVIIHGLHIHDIKAGNGGLIRDSTEHYGFRT
RSDGDAISIYGSTRVWIDHISMSNCQDGLIDVIMASTAVTISNCHLTHHNEVMLFGASDG
YSEDQVMQVTVAFNHFGQGLVQRMPRCRWGFIHVVNNDYTHWLMYAVGGSQHPTIISQGN
RFIAPQDINCKEVTKRDYAPESVWKTWNWRSEGDLMMNGAFFVESGSTVKNVPNKDVINA
KPGTFVTRLTRFAGALNCVKNKPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagattagagaagtactttagggttgaattgttgataattgtattatttgcaatatta
tttccaaattacacaagggctaacataaaagatttcgatgaggtatggcaacaacgagct
atacaagccaggaagaatgcccataaggcctaccaccccgatcctcataaagtcactcaa
gattttaattatcacgttcataagggcatagaggatgatgacgtggacagtaacaaaaca
aacagtagaagaaacctgaaaagccaaaaaagtggatgtacggccacaaacccaatcgac
cgttgttggagatgtgacaaggactggttcaagcaccggaagagactcgccaattgtgcc
ctaggtttcgcccgtggaaccaccggcggcaagcacggcaagatctacgtcgtcaccgac
ccctctgacaatgacctcgtcaaccccaagcctggaacgctccgctatgctgtcatccag
ccggagccactctggatcatcttcgcccacgacatgatcattcgcctcgccgaggagctc
atcgtgagtagccataagaccatcgatggccgtggagctagggttcatataagtaatggt
ggtcaaatcacacttcagtttgtggaaaatgtgataattcatggcttgcacattcatgat
atcaaggctgggaatggagggctgattagggattcgacggagcattatggattcagaacg
cgtagcgatggggatgcaatctcgatctatggatctacgcgggtttggatcgatcatatt
tcgatgtccaattgtcaagacggcctcattgacgtgatcatggcgtccacggctgtcacc
atctcaaattgtcacctaactcatcataatgaggtgatgttgtttggtgcaagtgatggg
tattcggaggatcaagtcatgcaagtaactgtggcattcaaccatttcggtcagggattg
gtccagagaatgcccagatgcagatggggtttcatccatgtagttaacaatgattataca
cattggctcatgtatgccgttggtggtagccaacatcctaccatcataagccaaggcaac
cgtttcatcgctcctcaagacataaattgcaaagaggtgacaaagagggattatgcacct
gagagtgtctggaagacatggaattggaggtcagagggtgatctcatgatgaatggagca
ttctttgttgaatctggtagtacagttaaaaatgtgcctaataaagacgtgatcaatgca
aagcctgggacatttgtgacgaggcttactcgctttgcaggtgctcttaattgtgttaaa
aataagccatgttag
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