Cannabis sativa (hemp): 115710948
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Entry
115710948 CDS
T08987
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115710948
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115710948
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115710948
03036 Chromosome and associated proteins [BR:
csav03036
]
115710948
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115710948
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115710948
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115710948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Cytokin_check_N
WDR54
Motif
Other DBs
NCBI-GeneID:
115710948
NCBI-ProteinID:
XP_030495155
LinkDB
All DBs
Position
3:47177624..47183642
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AA seq
495 aa
AA seq
DB search
MEWNFSQVFGERAPGEDVEEVDIITAMGFDASGDYLAVGDRGGRVVIFERKDGKHTSNQY
QPRTKLEELDFTPTWNPEFQYKTEFQSHEPEFDYLKSLEIEEKINKIRWCATPNGSLFIL
STNNKTIKLWKVKERKVKKVKEMDSSPYVSSENALLAEKSFMTGQDSNGHHSDWTDKMGK
NMSPTQYQHDEIVDLEDTAQTRCRKAYAHAHEFNINSISTNSDCETFISADDLRINLWNL
EISGQCFNIIDMKPSNMEDLTEVITIAEFHPIHCNFLAYGSSRGFIRLVDMRQSALCDHS
AIILEDGGSRGSKSFFTEIVASISDMKFSKDGRYILSRDYMNLKLWDMHMDSSPVAIYKI
HENLRPKLCELYDNDCIFDKFACCLSGDGMHYATGSYSNHLRIFSHGAGSDEGITIEASK
HPVSRKPVLHAAPRTRRSSLSNLTRRFYRHGNDNSSSGNNDFSCNLNSKLLHLAWHPEKN
LIACAAGNSLFMYHA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaacttctctcaggttttcggcgaacgagctccgggagaggatgttgaggaa
gttgatatcatcactgctatgggattcgacgctagcggtgattaccttgccgttggagat
agaggtggtcgtgttgtgatattcgaaagaaaagatgggaaacatacttcgaatcagtac
cagcctcgcactaagttggaggaactggattttacccctacttggaatcctgaatttcag
tacaagactgagtttcagagccatgagcctgagtttgactatttgaagagtttggaaatc
gaagagaagataaacaaaataagatggtgtgctacgcccaacggttcactctttatcctt
tccaccaacaacaagacaattaaattgtggaaggtgaaggaacgtaaggtaaagaaagta
aaagaaatggattcttctccgtatgtgagttcagagaatgcacttttagctgaaaagagc
ttcatgactggacaagattctaatggtcatcattcagattggacagataagatgggaaag
aacatgtcaccaacacaataccaacatgatgagattgtagacctagaagatactgcacaa
acaagatgtcggaaggcttatgctcatgctcatgagtttaatataaattccatctcaact
aatagcgactgtgagacatttatttctgcagatgaccttaggataaacttgtggaatctt
gagataagtggtcagtgcttcaacattattgacatgaagccatcaaatatggaggacctt
actgaggttataacaatagctgagtttcatccaattcattgcaattttctcgcatacggc
agctcaagaggatttattcgcctagttgacatgcgtcaatcagctttatgtgatcacagt
gcgataatattggaagatggaggttcacgcgggtcgaaatcatttttcacagagattgtt
gcatccatttctgatatgaagttctctaaggatgggcggtacatcttaagtcgcgattac
atgaatctaaagctatgggacatgcatatggattcctcaccagttgcaatatacaagatc
catgagaacctcagacccaagttgtgcgaattgtatgataatgactgcatatttgataaa
tttgcttgctgcctcagtggggatggaatgcattatgcaactgggtcttacagcaatcat
ttacgcattttctcccatggtgctggaagtgatgaaggaatcacaatagaagctagcaag
catcctgtcagcagaaagccagttttgcatgctgctccaaggactagaagatcttctttg
agcaatctgacgcgtcgattttaccgccatgggaatgataattcaagttcaggaaataat
gacttctcatgtaacttaaattccaagttattacatctagcatggcatccagaaaaaaac
ttgattgcttgtgctgctgggaatagcctgttcatgtatcatgcatag
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