Cannabis sativa (hemp): 115711027
Help
Entry
115711027 CDS
T08987
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115711027
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115711027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
115711027
NCBI-ProteinID:
XP_060968592
LinkDB
All DBs
Position
3:complement(47430921..47435706)
Genome browser
AA seq
697 aa
AA seq
DB search
MEIQNWSKRISVILGSSLCVIFLLWMLLCSSSTTSSQTNTIRPIRKVLESSIRGRELLSS
SSAPRIIHTTQRHKKVIVLDNGLVQISFSNPGGDVIGIKYNNMNNLLEPHNKYSNRGYWD
IEWGEGTTSGKANNYDKIEGTHFEIIEADENHIEISFVKKWNDSSRIFPVNMDKRFIMLR
NYSGFYTYGILEHPKEAPATQISVVRAAFKLQRKKFNYMAISDDRQRTMPSASDRTKGKR
LAYAEAVVLTRPSNPDLKGEVDDKYQYSSDHKDIRVHGWISSNPSVGFWVITPSHEFLTA
GPMKQELTSHVGPTSLSVFLSCHYVGKDLMVKLEKGETWKKVYGPISIFLNSASNNPNPE
SSLWNHAKAQAEEEVAKWPYSFINSKDYPLSDQRGSVIGQLFVKDRYLNKNNIHAKFAYV
GLAAPGNAGSWQWENKGYQFWSQADEKGNFIIKNVRPGNYNLYAWVPGVIGDYVYYKTIT
IQPGSKINLNNLLYQPPRNGPTLWEIGIPDRTASEFYVPHPLSNVTNRLFIDKESHRFRQ
YGLWDRYTDLYPEKDLEYTVGVNDYRKDWFFAHVNRKLENGTYRQTTWQVKFNLENVVQS
KSYTLQLALASASASDLQVRMNERNTYSPIFSTHLLGRDNSIARHGIHGTYWMFSINISG
YWLRQGQNILYLTSSRALGPFGGVLYDYLRFEAPSQT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaaaattggagtaaacgaattagtgtgattctaggttcgtccctttgtgtg
atttttcttttgtggatgctcttgtgttcatcatcaactacttcatcacagaccaacacc
atccggcctataagaaaagttttagaaagctctattagaggtagggaactattaagttcc
tcatcagcacctaggattattcatactactcaaagacacaaaaaggtgattgtcttagac
aatggtcttgtacaaatcagtttttcaaatccaggtggtgatgtaattggaattaagtac
aacaacatgaacaatcttcttgaaccacataataaatatagtaatagagggtattgggat
attgagtggggtgaaggcacaaccagtggcaaagctaataattatgacaaaatagaagga
acccattttgagatcattgaggcagatgagaatcatattgaaatttcattcgttaaaaaa
tggaatgactcctctcgcatatttccagtaaatatggacaaacgatttataatgctacgt
aactattcaggattctacacatatggaatacttgaacaccctaaagaagcaccagctaca
caaattagtgttgttagggctgctttcaagcttcaaagaaaaaaatttaattacatggca
atatcggatgataggcaaagaactatgccttcagcttcagatcgtacaaagggtaaaaga
cttgcttatgcagaagctgtagtattgactcgtccatccaaccctgaccttaaaggagag
gttgatgataaatatcaatactcaagtgatcacaaagatattagggtacatggttggatt
agttcaaatccatcagtgggcttttgggtaatcacaccaagccatgaatttctcacagct
gggcctatgaagcaagagctcacatctcatgtcggcccaacatcactctctgttttcttg
agttgtcactatgttggaaaggatctaatggtaaaacttgagaaaggagagacatggaaa
aaagtttatggccccatttcaatttttcttaattctgcctcaaacaaccctaatcctgaa
tcctcattatggaatcatgctaaagcacaggcagaagaggaagttgccaaatggccatat
agcttcataaattccaaggactatcccctttctgatcaaagaggaagtgttataggtcaa
ttgtttgttaaggataggtacttgaacaaaaataacatacatgccaaatttgcttatgtg
ggattagctgcacctggaaatgctggttcatggcaatgggaaaataaggggtaccaattt
tggagtcaagcagatgagaaaggaaatttcatcataaaaaatgttcgacccggcaattac
aatttatatgcttgggtccctggtgttataggagactatgtctactacaaaacaattact
attcagccagggagcaaaataaatttaaataatctactttatcaacctccaagaaatgga
cctaccctttgggaaattggcattcctgaccgaacagcttcagaattttacgtgccacac
ccattgtctaatgtcactaatagactcttcatcgataaagaaagtcataggttcaggcaa
tatggtttgtgggatcgttatactgatttatatccagaaaaagatctcgaatacactgtt
ggcgtgaatgattatcgaaaagattggttctttgctcatgtcaatagaaaactagaaaat
gggacataccgacaaacgacatggcaagtgaaattcaaccttgaaaatgtggtgcaatcc
aaaagctacactcttcaattagcattagcttcagcaagtgcttcagacttacaggttcga
atgaacgagcgtaatacgtatagtcccatattctcaacacatttattagggagagataat
tcgatagcaagacatggaattcatgggacatattggatgttcagcattaatatctctggc
tattggctccgtcaaggacaaaatatactttatttgacttcatcaagagctttaggtcct
tttggaggagtactctatgattatcttcgattcgaagccccatctcaaacataa
DBGET
integrated database retrieval system
