Cannabis sativa (hemp): 115711203
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Entry
115711203 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115711203 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115711203
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115711203
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
115711203
NCBI-ProteinID:
XP_060967144
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Position
3:42233754..42304284
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AA seq
880 aa
AA seq
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MAEEETTGDCDCAWQRRSAQSDENQLHPIPFCLGRTTTSTTTYVVENFNPNNNKSVINYT
YDTQAFTRAWQKACSTKGRVILVVPKEKKYHLKPIKFGGPCQFEQLNFEILGTIVASNEQ
SDYGEYGSRWLIFDNVKNLLVQGGGTLDGYGDIWWNKPCKMNKSQLCKQAPTAITFHNCE
NLVVRNLKVRNAQQTHISFNHCRNVKASHLTISASENSPSTNGIYVSHTEDINISHSVIG
TGQYTFLFILLLLNLILLFIFIAIQFKYEKNYIINSSGADCISIKSGTKKVRASDITCGP
GYGISIGDLGSGNSEAHVTDVIVDRANFYETKFGVRIKTVQGGSGSASNIRFKNIQMNNV
ENPIVIEQNYCDQSKKLCKQQGSSSSAVQVSKVSFENIKGTSVTKEAIKLDCSESFPCKD
IKMENVHFTYYKNQGHTKAVCQNVEFTRFRDIIPSCDSDTIDHRKPQPQTQPKPQLKPQP
QPPQPKPQPKPKPRSQPKPRPVPVQKRGVINVDDFGAKGRGQDDTMAFEKAWQKACSSNV
PIVLVVPSQNTYLVKPIVFRGPCKSKVTVQIDGTIEAPSDPSDYNGHESNWLMFENINDL
VVQGGGTINGNGNSWWKLSCNIDTSLPCKPAPTGLTFSNCNNLVVRDLHVKDCQQMQVMF
VNCNTVMAFNLTVTAPGDSPNTDGIHVTRCENVDISNSVIGTGDDCISIVSGSRNVTATD
ITCGPGHGISIGSLGAGHAEAHVSDIFVRRAKFYETTNGVRIKTWQGGRGDARNIKFQDI
EMHNVQNPIIIDQNYCDRRRMVCKQEESTVQVSDVLYQNIKGTSATQVAIMFDCSQSHEC
ENIILQDVELQLPQHRAHAEALCNNVDLTHIGRVTPLCPN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagaaaccaccggcgactgtgactgtgcgtggcagagacgatctgctcaa
tctgatgaaaatcaacttcaccccataccattttgcttaggtagaactactacctcaaca
actacttatgtagttgaaaattttaacccaaacaataataagtctgttataaactacact
tatgatactcaggcttttactagggcatggcagaaagcatgctctaccaaaggaagagta
attttggtggttccaaaagagaaaaagtatcacctcaagcctataaaattcggtggtcca
tgccaattcgagcaacttaattttgaaattcttggaacaatagttgcatctaatgagcaa
tcagattatggtgaatatggtagtcgatggctcatttttgacaatgtcaaaaatttacta
gtccaaggtggtggtaccttagatggctatggtgatatatggtggaacaaaccatgcaaa
atgaacaaatctcaactgtgtaaacaagcgccaacggctataacttttcataattgtgag
aatttggtagtgagaaacttaaaagtacgaaatgcacaacaaacacatatatcatttaat
cattgtagaaacgttaaagcttcacatctaacaataagtgcatcagaaaatagtcccagt
actaatggaatatatgtttcacatactgaagatattaacatctcacattctgttattgga
actggtcagtatacatttttatttatattattattattaaatttaattttattatttatt
tttattgcgattcagtttaaatatgagaaaaactatattataaattcttcaggtgcggac
tgcatctcaattaagagtggaactaaaaaagtaagagcttcagatataacttgtggacca
ggttatgggataagcattggagacttgggttcgggaaactctgaagctcatgttacagac
gtgattgtagatagagctaatttttatgaaactaaatttggagttagaataaaaactgtt
cagggtggttcaggaagtgcaagcaatatcagatttaaaaatattcaaatgaataatgtt
gagaaccccattgtaatagaacaaaactactgtgaccaaagtaaaaagctttgcaaacaa
cagggctcatcatcatcggcagttcaagttagtaaagtgtcttttgaaaacattaagggt
acaagtgtaaccaaagaagctattaaattggactgcagtgagagttttccttgcaaagac
attaaaatggaaaatgttcacttcacatactataaaaaccaaggccataccaaagctgtg
tgccaaaatgtcgaattcactcgttttagagatattattccaagctgtgattctgatacc
attgaccaccgaaagcctcagccacagacacagccaaagcctcaactgaagcctcaacct
caaccgcctcagcctaagcctcagcctaagcctaagcctcgatctcaaccaaagccaagg
cctgtgccagttcaaaaacgaggagttattaatgttgatgattttggagcaaaaggaagg
ggccaagatgacacgatggcatttgagaaggcatggcagaaggcttgttcatctaatgtt
cctattgtactagtggtgccttctcaaaacacctatcttgttaagccaattgtgttccgc
ggtccatgcaaatccaaagttacagttcagattgatgggactatagaagcaccctccgat
ccatcagactacaatggacacgaaagcaactggcttatgtttgaaaatattaatgattta
gtagtccaaggtggtggaaccattaacggtaatggaaattcttggtggaagctctcctgc
aacattgatacatcactcccatgcaagccagcaccaaccggtttaactttttcaaattgt
aacaacttggtggtgagagatttacatgtaaaagactgccaacaaatgcaagtcatgttt
gtgaattgcaacacagtcatggctttcaatctcacagtcactgcaccaggcgatagtccc
aacactgatggaatccatgtaacacgttgtgagaacgtggacatctctaactctgtcatt
ggaacaggtgatgattgcatatctattgtgagtggatcccgaaatgttacagccacagac
ataacctgtggacctggtcacggaatcagtattggaagtttgggagctggacatgcagaa
gctcatgtttctgatatattcgtccgcagagctaaattttacgaaaccactaatggagtt
cgaattaaaacttggcagggaggtagaggagatgcaaggaatattaaattccaagacata
gagatgcataatgtgcagaacccaatcataatcgatcaaaattattgtgatcgccgtaga
atggtctgcaaacaagaggaatctacggttcaagtgagtgatgtgttgtaccaaaacatt
aaaggtacaagtgccactcaagttgccataatgttcgattgtagtcagagtcatgaatgt
gaaaatattatattacaagatgtcgagctacaactaccccaacatagagcacatgctgaa
gctttgtgcaacaatgtggacctcactcatattggacgtgttactcctctgtgtccaaat
tag
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